Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TNFSF4P23510 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TNFSF4P23510 LINC00896-202ENST00000609602 2128 ntBASIC14.66□□□□□ -0.06
TNFSF4P23510 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TNFSF4P23510 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TNFSF4P23510 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TNFSF4P23510 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TNFSF4P23510 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
TNFSF4P23510 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TNFSF4P23510 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TNFSF4P23510 HLA-A-201ENST00000376802 1334 ntBASIC14.66□□□□□ -0.06
TNFSF4P23510 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
TNFSF4P23510 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TNFSF4P23510 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TNFSF4P23510 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TNFSF4P23510 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TNFSF4P23510 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
TNFSF4P23510 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
TNFSF4P23510 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TNFSF4P23510 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TNFSF4P23510 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TNFSF4P23510 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TNFSF4P23510 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TNFSF4P23510 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC14.65□□□□□ -0.06
TNFSF4P23510 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TNFSF4P23510 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TNFSF4P23510 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TNFSF4P23510 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TNFSF4P23510 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TNFSF4P23510 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TNFSF4P23510 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TNFSF4P23510 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TNFSF4P23510 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TNFSF4P23510 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.65□□□□□ -0.06
TNFSF4P23510 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TNFSF4P23510 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.65□□□□□ -0.06
TNFSF4P23510 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.65□□□□□ -0.06
TNFSF4P23510 HNRNPDP1-201ENST00000439535 754 ntBASIC14.65□□□□□ -0.06
TNFSF4P23510 AC092910.1-201ENST00000482027 1129 ntBASIC14.65□□□□□ -0.06
TNFSF4P23510 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.65□□□□□ -0.06
TNFSF4P23510 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.65□□□□□ -0.06
TNFSF4P23510 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.65□□□□□ -0.06
TNFSF4P23510 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
TNFSF4P23510 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.65□□□□□ -0.06
TNFSF4P23510 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.65□□□□□ -0.06
TNFSF4P23510 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.65□□□□□ -0.06
TNFSF4P23510 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.65□□□□□ -0.06
TNFSF4P23510 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
TNFSF4P23510 AL356488.2-201ENST00000602755 427 ntBASIC14.65□□□□□ -0.06
TNFSF4P23510 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.65□□□□□ -0.06
TNFSF4P23510 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TNFSF4P23510 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.65□□□□□ -0.06
TNFSF4P23510 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC14.65□□□□□ -0.06
TNFSF4P23510 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TNFSF4P23510 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TNFSF4P23510 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TNFSF4P23510 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TNFSF4P23510 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC14.65□□□□□ -0.06
TNFSF4P23510 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TNFSF4P23510 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
TNFSF4P23510 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
TNFSF4P23510 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TNFSF4P23510 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TNFSF4P23510 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.65□□□□□ -0.06
TNFSF4P23510 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
TNFSF4P23510 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TNFSF4P23510 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
TNFSF4P23510 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TNFSF4P23510 TPR-209ENST00000613151 2478 ntTSL 5 BASIC14.65□□□□□ -0.06
TNFSF4P23510 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.65□□□□□ -0.06
TNFSF4P23510 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
TNFSF4P23510 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC14.65□□□□□ -0.07
TNFSF4P23510 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TNFSF4P23510 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.64□□□□□ -0.07
TNFSF4P23510 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC14.64□□□□□ -0.07
TNFSF4P23510 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TNFSF4P23510 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.64□□□□□ -0.07
TNFSF4P23510 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TNFSF4P23510 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TNFSF4P23510 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TNFSF4P23510 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TNFSF4P23510 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TNFSF4P23510 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.64□□□□□ -0.07
TNFSF4P23510 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TNFSF4P23510 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.64□□□□□ -0.07
TNFSF4P23510 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TNFSF4P23510 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TNFSF4P23510 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TNFSF4P23510 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TNFSF4P23510 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TNFSF4P23510 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TNFSF4P23510 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TNFSF4P23510 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.64□□□□□ -0.07
TNFSF4P23510 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.64□□□□□ -0.07
TNFSF4P23510 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
TNFSF4P23510 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TNFSF4P23510 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.64□□□□□ -0.07
TNFSF4P23510 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TNFSF4P23510 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TNFSF4P23510 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms