Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.84■□□□□ 0.29
CDH3P22223 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.84■□□□□ 0.29
CDH3P22223 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CDH3P22223 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
CDH3P22223 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CDH3P22223 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH3P22223 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH3P22223 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.84■□□□□ 0.29
CDH3P22223 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH3P22223 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDH3P22223 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDH3P22223 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDH3P22223 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDH3P22223 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDH3P22223 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH3P22223 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH3P22223 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH3P22223 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH3P22223 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDH3P22223 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDH3P22223 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH3P22223 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.83■□□□□ 0.28
CDH3P22223 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH3P22223 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.83■□□□□ 0.28
CDH3P22223 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDH3P22223 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH3P22223 LAGE3P1-201ENST00000425356 484 ntBASIC16.83■□□□□ 0.28
CDH3P22223 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.83■□□□□ 0.28
CDH3P22223 AC243591.1-201ENST00000452967 1364 ntBASIC16.83■□□□□ 0.28
CDH3P22223 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CDH3P22223 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH3P22223 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH3P22223 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.83■□□□□ 0.28
CDH3P22223 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.83■□□□□ 0.28
CDH3P22223 AC108860.2-201ENST00000562760 2183 ntBASIC16.83■□□□□ 0.28
CDH3P22223 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH3P22223 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CDH3P22223 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH3P22223 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH3P22223 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.83■□□□□ 0.28
CDH3P22223 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.83■□□□□ 0.28
CDH3P22223 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDH3P22223 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.83■□□□□ 0.28
CDH3P22223 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.83■□□□□ 0.28
CDH3P22223 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH3P22223 AC107918.4-202ENST00000641623 219 ntBASIC16.83■□□□□ 0.28
CDH3P22223 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH3P22223 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH3P22223 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.83■□□□□ 0.28
CDH3P22223 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH3P22223 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH3P22223 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDH3P22223 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDH3P22223 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDH3P22223 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDH3P22223 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH3P22223 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CDH3P22223 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.82■□□□□ 0.28
CDH3P22223 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH3P22223 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
CDH3P22223 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CDH3P22223 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH3P22223 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH3P22223 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDH3P22223 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.82■□□□□ 0.28
CDH3P22223 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDH3P22223 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.82■□□□□ 0.28
CDH3P22223 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.82■□□□□ 0.28
CDH3P22223 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CDH3P22223 PRYP5-201ENST00000451909 266 ntBASIC16.82■□□□□ 0.28
CDH3P22223 AC092910.1-201ENST00000482027 1129 ntBASIC16.82■□□□□ 0.28
CDH3P22223 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.82■□□□□ 0.28
CDH3P22223 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH3P22223 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.82■□□□□ 0.28
CDH3P22223 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.82■□□□□ 0.28
CDH3P22223 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.82■□□□□ 0.28
CDH3P22223 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.82■□□□□ 0.28
CDH3P22223 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CDH3P22223 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.82■□□□□ 0.28
CDH3P22223 AC008735.5-201ENST00000623544 497 ntBASIC16.82■□□□□ 0.28
CDH3P22223 AC116407.3-201ENST00000623905 1129 ntBASIC16.82■□□□□ 0.28
CDH3P22223 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH3P22223 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH3P22223 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.82■□□□□ 0.28
CDH3P22223 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH3P22223 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDH3P22223 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CDH3P22223 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.82■□□□□ 0.28
CDH3P22223 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH3P22223 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.82■□□□□ 0.28
CDH3P22223 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDH3P22223 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH3P22223 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH3P22223 AC148477.5-201ENST00000625164 1645 ntBASIC16.81■□□□□ 0.28
CDH3P22223 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH3P22223 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.81■□□□□ 0.28
CDH3P22223 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH3P22223 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH3P22223 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH3P22223 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms