Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DEFA4P12838 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC13.98□□□□□ -0.17
DEFA4P12838 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC13.98□□□□□ -0.17
DEFA4P12838 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DEFA4P12838 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
DEFA4P12838 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
DEFA4P12838 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
DEFA4P12838 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
DEFA4P12838 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC13.98□□□□□ -0.17
DEFA4P12838 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DEFA4P12838 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DEFA4P12838 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC13.98□□□□□ -0.17
DEFA4P12838 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DEFA4P12838 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
DEFA4P12838 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
DEFA4P12838 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DEFA4P12838 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
DEFA4P12838 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DEFA4P12838 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
DEFA4P12838 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC13.97□□□□□ -0.17
DEFA4P12838 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DEFA4P12838 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC13.97□□□□□ -0.17
DEFA4P12838 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
DEFA4P12838 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC13.97□□□□□ -0.17
DEFA4P12838 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DEFA4P12838 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DEFA4P12838 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
DEFA4P12838 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
DEFA4P12838 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
DEFA4P12838 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC13.97□□□□□ -0.17
DEFA4P12838 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DEFA4P12838 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DEFA4P12838 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC13.97□□□□□ -0.17
DEFA4P12838 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
DEFA4P12838 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
DEFA4P12838 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
DEFA4P12838 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC13.97□□□□□ -0.17
DEFA4P12838 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC13.97□□□□□ -0.17
DEFA4P12838 AC068472.1-201ENST00000474589 881 ntBASIC13.97□□□□□ -0.17
DEFA4P12838 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC13.97□□□□□ -0.17
DEFA4P12838 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
DEFA4P12838 HYMAI.1-201ENST00000620949 238 ntBASIC13.97□□□□□ -0.17
DEFA4P12838 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
DEFA4P12838 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
DEFA4P12838 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
DEFA4P12838 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC13.97□□□□□ -0.17
DEFA4P12838 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC13.97□□□□□ -0.17
DEFA4P12838 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DEFA4P12838 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DEFA4P12838 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC13.97□□□□□ -0.17
DEFA4P12838 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
DEFA4P12838 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DEFA4P12838 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
DEFA4P12838 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
DEFA4P12838 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
DEFA4P12838 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC13.96□□□□□ -0.17
DEFA4P12838 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
DEFA4P12838 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
DEFA4P12838 LINC00554-201ENST00000564841 3011 ntBASIC13.96□□□□□ -0.17
DEFA4P12838 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
DEFA4P12838 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
DEFA4P12838 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.17
DEFA4P12838 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
DEFA4P12838 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
DEFA4P12838 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
DEFA4P12838 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
DEFA4P12838 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC13.96□□□□□ -0.17
DEFA4P12838 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC13.96□□□□□ -0.17
DEFA4P12838 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
DEFA4P12838 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC13.96□□□□□ -0.17
DEFA4P12838 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
DEFA4P12838 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
DEFA4P12838 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
DEFA4P12838 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
DEFA4P12838 TSPY22P-201ENST00000427496 604 ntBASIC13.96□□□□□ -0.17
DEFA4P12838 SAPCD2P2-201ENST00000431719 1174 ntBASIC13.96□□□□□ -0.17
DEFA4P12838 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC13.96□□□□□ -0.17
DEFA4P12838 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC13.96□□□□□ -0.17
DEFA4P12838 AL049597.2-201ENST00000565575 961 ntBASIC13.96□□□□□ -0.17
DEFA4P12838 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
DEFA4P12838 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC13.96□□□□□ -0.17
DEFA4P12838 AC083849.1-201ENST00000615227 514 ntBASIC13.96□□□□□ -0.17
DEFA4P12838 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC13.96□□□□□ -0.17
DEFA4P12838 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
DEFA4P12838 DFFB-212ENST00000625756 649 ntTSL 5 BASIC13.96□□□□□ -0.17
DEFA4P12838 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC13.96□□□□□ -0.17
DEFA4P12838 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.96□□□□□ -0.17
DEFA4P12838 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
DEFA4P12838 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
DEFA4P12838 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
DEFA4P12838 AC005915.1-201ENST00000624912 2018 ntBASIC13.96□□□□□ -0.17
DEFA4P12838 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC13.96□□□□□ -0.17
DEFA4P12838 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
DEFA4P12838 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
DEFA4P12838 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
DEFA4P12838 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
DEFA4P12838 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
DEFA4P12838 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
DEFA4P12838 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
DEFA4P12838 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms