Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
THRAP10827 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
THRAP10827 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
THRAP10827 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
THRAP10827 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.22■□□□□ 0.35
THRAP10827 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
THRAP10827 PCDHA14-201ENST00000506751 2298 ntBASIC17.22■□□□□ 0.35
THRAP10827 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
THRAP10827 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
THRAP10827 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
THRAP10827 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
THRAP10827 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
THRAP10827 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
THRAP10827 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.21■□□□□ 0.35
THRAP10827 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
THRAP10827 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
THRAP10827 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
THRAP10827 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
THRAP10827 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.21■□□□□ 0.35
THRAP10827 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
THRAP10827 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
THRAP10827 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.21■□□□□ 0.35
THRAP10827 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
THRAP10827 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
THRAP10827 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
THRAP10827 SCARNA2-201ENST00000458748 420 ntBASIC17.21■□□□□ 0.35
THRAP10827 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
THRAP10827 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
THRAP10827 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.21■□□□□ 0.35
THRAP10827 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.21■□□□□ 0.35
THRAP10827 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.21■□□□□ 0.35
THRAP10827 AL671883.3-201ENST00000603274 991 ntBASIC17.21■□□□□ 0.35
THRAP10827 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.21■□□□□ 0.35
THRAP10827 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.21■□□□□ 0.35
THRAP10827 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
THRAP10827 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
THRAP10827 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.21■□□□□ 0.35
THRAP10827 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
THRAP10827 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.21■□□□□ 0.35
THRAP10827 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
THRAP10827 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
THRAP10827 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
THRAP10827 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
THRAP10827 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
THRAP10827 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.21■□□□□ 0.35
THRAP10827 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
THRAP10827 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.21■□□□□ 0.34
THRAP10827 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.21■□□□□ 0.34
THRAP10827 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.21■□□□□ 0.34
THRAP10827 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
THRAP10827 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.2■□□□□ 0.34
THRAP10827 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
THRAP10827 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
THRAP10827 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
THRAP10827 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
THRAP10827 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
THRAP10827 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
THRAP10827 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
THRAP10827 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
THRAP10827 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
THRAP10827 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
THRAP10827 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.2■□□□□ 0.34
THRAP10827 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
THRAP10827 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.2■□□□□ 0.34
THRAP10827 AC093909.1-201ENST00000504731 1122 ntBASIC17.2■□□□□ 0.34
THRAP10827 RNPS1P1-201ENST00000507437 918 ntBASIC17.2■□□□□ 0.34
THRAP10827 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.2■□□□□ 0.34
THRAP10827 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
THRAP10827 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.2■□□□□ 0.34
THRAP10827 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
THRAP10827 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
THRAP10827 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.2■□□□□ 0.34
THRAP10827 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.2■□□□□ 0.34
THRAP10827 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.2■□□□□ 0.34
THRAP10827 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
THRAP10827 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
THRAP10827 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
THRAP10827 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
THRAP10827 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.2■□□□□ 0.34
THRAP10827 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.2■□□□□ 0.34
THRAP10827 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
THRAP10827 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
THRAP10827 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
THRAP10827 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
THRAP10827 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
THRAP10827 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
THRAP10827 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.2■□□□□ 0.34
THRAP10827 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.2■□□□□ 0.34
THRAP10827 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
THRAP10827 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.19■□□□□ 0.34
THRAP10827 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
THRAP10827 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
THRAP10827 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
THRAP10827 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
THRAP10827 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
THRAP10827 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
THRAP10827 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.19■□□□□ 0.34
THRAP10827 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
THRAP10827 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.19■□□□□ 0.34
THRAP10827 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms