Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
SP9P0CG40 AL080243.2-201ENST00000418783 582 ntBASIC16.64■□□□□ 0.25
SP9P0CG40 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SP9P0CG40 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.64■□□□□ 0.25
SP9P0CG40 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.64■□□□□ 0.25
SP9P0CG40 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.64■□□□□ 0.25
SP9P0CG40 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
SP9P0CG40 SNX29P1-201ENST00000548357 1007 ntBASIC16.64■□□□□ 0.25
SP9P0CG40 AL133215.2-201ENST00000609242 977 ntBASIC16.64■□□□□ 0.25
SP9P0CG40 MIR6787-201ENST00000616675 61 ntBASIC16.64■□□□□ 0.25
SP9P0CG40 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.64■□□□□ 0.25
SP9P0CG40 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.64■□□□□ 0.25
SP9P0CG40 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.64■□□□□ 0.25
SP9P0CG40 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SP9P0CG40 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SP9P0CG40 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.64■□□□□ 0.25
SP9P0CG40 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.64■□□□□ 0.25
SP9P0CG40 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.64■□□□□ 0.25
SP9P0CG40 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SP9P0CG40 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.64■□□□□ 0.25
SP9P0CG40 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
SP9P0CG40 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.64■□□□□ 0.25
SP9P0CG40 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SP9P0CG40 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SP9P0CG40 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SP9P0CG40 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SP9P0CG40 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SP9P0CG40 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SP9P0CG40 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.63■□□□□ 0.25
SP9P0CG40 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SP9P0CG40 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.63■□□□□ 0.25
SP9P0CG40 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
SP9P0CG40 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SP9P0CG40 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SP9P0CG40 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.63■□□□□ 0.25
SP9P0CG40 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.63■□□□□ 0.25
SP9P0CG40 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SP9P0CG40 FAM220BP-201ENST00000377689 816 ntBASIC16.63■□□□□ 0.25
SP9P0CG40 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.63■□□□□ 0.25
SP9P0CG40 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.63■□□□□ 0.25
SP9P0CG40 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.63■□□□□ 0.25
SP9P0CG40 TMEM14DP-201ENST00000422205 345 ntBASIC16.63■□□□□ 0.25
SP9P0CG40 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.63■□□□□ 0.25
SP9P0CG40 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.63■□□□□ 0.25
SP9P0CG40 AC055876.2-201ENST00000531834 546 ntBASIC16.63■□□□□ 0.25
SP9P0CG40 BANF1P1-201ENST00000553684 263 ntBASIC16.63■□□□□ 0.25
SP9P0CG40 GPR182-203ENST00000622922 591 ntBASIC16.63■□□□□ 0.25
SP9P0CG40 LINC01451-201ENST00000623792 534 ntBASIC16.63■□□□□ 0.25
SP9P0CG40 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.63■□□□□ 0.25
SP9P0CG40 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SP9P0CG40 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.63■□□□□ 0.25
SP9P0CG40 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SP9P0CG40 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SP9P0CG40 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.63■□□□□ 0.25
SP9P0CG40 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SP9P0CG40 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SP9P0CG40 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
SP9P0CG40 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SP9P0CG40 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SP9P0CG40 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SP9P0CG40 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SP9P0CG40 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.63■□□□□ 0.25
SP9P0CG40 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SP9P0CG40 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SP9P0CG40 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SP9P0CG40 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.62■□□□□ 0.25
SP9P0CG40 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.62■□□□□ 0.25
SP9P0CG40 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.62■□□□□ 0.25
SP9P0CG40 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.62■□□□□ 0.25
SP9P0CG40 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.62■□□□□ 0.25
SP9P0CG40 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SP9P0CG40 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SP9P0CG40 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SP9P0CG40 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SP9P0CG40 HAUS4P1-201ENST00000406739 1145 ntBASIC16.62■□□□□ 0.25
SP9P0CG40 MYCLP2-201ENST00000449268 967 ntBASIC16.62■□□□□ 0.25
SP9P0CG40 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SP9P0CG40 RN7SL618P-201ENST00000477850 296 ntBASIC16.62■□□□□ 0.25
SP9P0CG40 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SP9P0CG40 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SP9P0CG40 SPDYE18-201ENST00000510091 1050 ntBASIC16.62■□□□□ 0.25
SP9P0CG40 PRYP6-201ENST00000514804 343 ntBASIC16.62■□□□□ 0.25
SP9P0CG40 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SP9P0CG40 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC16.62■□□□□ 0.25
SP9P0CG40 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.62■□□□□ 0.25
SP9P0CG40 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SP9P0CG40 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.62■□□□□ 0.25
SP9P0CG40 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SP9P0CG40 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.62■□□□□ 0.25
SP9P0CG40 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
SP9P0CG40 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SP9P0CG40 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.62■□□□□ 0.25
SP9P0CG40 KRT8P44-201ENST00000441609 1350 ntBASIC16.62■□□□□ 0.25
SP9P0CG40 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SP9P0CG40 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
SP9P0CG40 AC131009.4-201ENST00000624048 1740 ntBASIC16.62■□□□□ 0.25
SP9P0CG40 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SP9P0CG40 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SP9P0CG40 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SP9P0CG40 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms