Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXC6P09630 AC008764.6-201ENST00000595909 2069 ntBASIC19.21■□□□□ 0.67
HOXC6P09630 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
HOXC6P09630 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXC6P09630 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
HOXC6P09630 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXC6P09630 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
HOXC6P09630 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
HOXC6P09630 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXC6P09630 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.2■□□□□ 0.66
HOXC6P09630 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
HOXC6P09630 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXC6P09630 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.2■□□□□ 0.66
HOXC6P09630 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.2■□□□□ 0.66
HOXC6P09630 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
HOXC6P09630 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
HOXC6P09630 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.2■□□□□ 0.66
HOXC6P09630 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXC6P09630 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXC6P09630 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXC6P09630 RNU1-129P-201ENST00000384064 167 ntBASIC19.2■□□□□ 0.66
HOXC6P09630 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC19.2■□□□□ 0.66
HOXC6P09630 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXC6P09630 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC19.2■□□□□ 0.66
HOXC6P09630 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC19.2■□□□□ 0.66
HOXC6P09630 U1.21-201ENST00000580816 167 ntBASIC19.2■□□□□ 0.66
HOXC6P09630 COQ4-205ENST00000609948 956 ntTSL 2 BASIC19.2■□□□□ 0.66
HOXC6P09630 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
HOXC6P09630 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXC6P09630 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HOXC6P09630 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXC6P09630 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXC6P09630 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HOXC6P09630 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.2■□□□□ 0.66
HOXC6P09630 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXC6P09630 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.2■□□□□ 0.66
HOXC6P09630 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXC6P09630 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
HOXC6P09630 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
HOXC6P09630 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXC6P09630 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXC6P09630 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXC6P09630 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXC6P09630 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC19.19■□□□□ 0.66
HOXC6P09630 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
HOXC6P09630 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXC6P09630 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC19.19■□□□□ 0.66
HOXC6P09630 AC092580.3-201ENST00000430932 139 ntBASIC19.19■□□□□ 0.66
HOXC6P09630 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.19■□□□□ 0.66
HOXC6P09630 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.19■□□□□ 0.66
HOXC6P09630 IGHV3-42-201ENST00000520410 361 ntBASIC19.19■□□□□ 0.66
HOXC6P09630 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC19.19■□□□□ 0.66
HOXC6P09630 COQ6-210ENST00000554920 649 ntTSL 3 BASIC19.19■□□□□ 0.66
HOXC6P09630 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
HOXC6P09630 AC091167.2-201ENST00000579581 588 ntBASIC19.19■□□□□ 0.66
HOXC6P09630 MIR6080-201ENST00000617359 66 ntBASIC19.19■□□□□ 0.66
HOXC6P09630 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HOXC6P09630 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
HOXC6P09630 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
HOXC6P09630 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HOXC6P09630 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC19.19■□□□□ 0.66
HOXC6P09630 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXC6P09630 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HOXC6P09630 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HOXC6P09630 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
HOXC6P09630 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC19.19■□□□□ 0.66
HOXC6P09630 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
HOXC6P09630 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXC6P09630 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HOXC6P09630 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HOXC6P09630 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
HOXC6P09630 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
HOXC6P09630 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HOXC6P09630 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
HOXC6P09630 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
HOXC6P09630 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HOXC6P09630 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HOXC6P09630 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
HOXC6P09630 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
HOXC6P09630 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HOXC6P09630 COX11-202ENST00000571584 1108 ntTSL 2 BASIC19.18■□□□□ 0.66
HOXC6P09630 AC027307.2-201ENST00000591252 911 ntBASIC19.18■□□□□ 0.66
HOXC6P09630 AL031055.1-201ENST00000606362 631 ntBASIC19.18■□□□□ 0.66
HOXC6P09630 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.18■□□□□ 0.66
HOXC6P09630 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
HOXC6P09630 GNAS-203ENST00000306120 1878 ntBASIC19.18■□□□□ 0.66
HOXC6P09630 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.18■□□□□ 0.66
HOXC6P09630 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HOXC6P09630 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.18■□□□□ 0.66
HOXC6P09630 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HOXC6P09630 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HOXC6P09630 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
HOXC6P09630 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
HOXC6P09630 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HOXC6P09630 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
HOXC6P09630 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.17■□□□□ 0.66
HOXC6P09630 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HOXC6P09630 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HOXC6P09630 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HOXC6P09630 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms