Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN1P07384 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN1P07384 SLC25A1P3-201ENST00000395415 828 ntBASIC16.89■□□□□ 0.29
CAPN1P07384 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
CAPN1P07384 AL022342.1-201ENST00000400363 863 ntBASIC16.89■□□□□ 0.29
CAPN1P07384 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.89■□□□□ 0.29
CAPN1P07384 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN1P07384 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.89■□□□□ 0.29
CAPN1P07384 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.89■□□□□ 0.29
CAPN1P07384 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.89■□□□□ 0.29
CAPN1P07384 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.89■□□□□ 0.29
CAPN1P07384 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN1P07384 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN1P07384 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.89■□□□□ 0.29
CAPN1P07384 AP001269.4-201ENST00000609611 512 ntBASIC16.89■□□□□ 0.29
CAPN1P07384 AC148477.8-201ENST00000624298 468 ntBASIC16.89■□□□□ 0.29
CAPN1P07384 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.89■□□□□ 0.29
CAPN1P07384 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.89■□□□□ 0.29
CAPN1P07384 AC093525.9-201ENST00000624961 1746 ntBASIC16.89■□□□□ 0.29
CAPN1P07384 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN1P07384 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.89■□□□□ 0.29
CAPN1P07384 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.89■□□□□ 0.29
CAPN1P07384 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.89■□□□□ 0.29
CAPN1P07384 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN1P07384 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN1P07384 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN1P07384 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN1P07384 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN1P07384 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN1P07384 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CAPN1P07384 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN1P07384 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN1P07384 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN1P07384 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN1P07384 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN1P07384 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.88■□□□□ 0.29
CAPN1P07384 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CAPN1P07384 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CAPN1P07384 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN1P07384 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN1P07384 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN1P07384 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN1P07384 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CAPN1P07384 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CAPN1P07384 LINC02012-201ENST00000608206 1725 ntBASIC16.88■□□□□ 0.29
CAPN1P07384 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN1P07384 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.88■□□□□ 0.29
CAPN1P07384 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN1P07384 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN1P07384 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.88■□□□□ 0.29
CAPN1P07384 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN1P07384 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.88■□□□□ 0.29
CAPN1P07384 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN1P07384 KRT18P67-201ENST00000432816 1264 ntBASIC16.88■□□□□ 0.29
CAPN1P07384 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CAPN1P07384 FGFR3P6-201ENST00000457012 610 ntBASIC16.88■□□□□ 0.29
CAPN1P07384 AC122714.2-201ENST00000502787 707 ntBASIC16.88■□□□□ 0.29
CAPN1P07384 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.88■□□□□ 0.29
CAPN1P07384 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.88■□□□□ 0.29
CAPN1P07384 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.88■□□□□ 0.29
CAPN1P07384 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.88■□□□□ 0.29
CAPN1P07384 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN1P07384 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN1P07384 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN1P07384 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.88■□□□□ 0.29
CAPN1P07384 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN1P07384 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN1P07384 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.88■□□□□ 0.29
CAPN1P07384 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN1P07384 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.88■□□□□ 0.29
CAPN1P07384 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CAPN1P07384 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN1P07384 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN1P07384 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN1P07384 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CAPN1P07384 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CAPN1P07384 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CAPN1P07384 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.87■□□□□ 0.29
CAPN1P07384 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CAPN1P07384 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.87■□□□□ 0.29
CAPN1P07384 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CAPN1P07384 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CAPN1P07384 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CAPN1P07384 AL049757.1-201ENST00000616842 1596 ntBASIC16.87■□□□□ 0.29
CAPN1P07384 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CAPN1P07384 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CAPN1P07384 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CAPN1P07384 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.87■□□□□ 0.29
CAPN1P07384 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CAPN1P07384 RBM17P3-201ENST00000417687 1192 ntBASIC16.87■□□□□ 0.29
CAPN1P07384 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CAPN1P07384 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
CAPN1P07384 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.87■□□□□ 0.29
CAPN1P07384 AC064862.7-201ENST00000604520 867 ntBASIC16.87■□□□□ 0.29
CAPN1P07384 BX640515.1-201ENST00000617215 977 ntBASIC16.87■□□□□ 0.29
CAPN1P07384 AL773604.1-201ENST00000617417 272 ntBASIC16.87■□□□□ 0.29
CAPN1P07384 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.87■□□□□ 0.29
CAPN1P07384 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CAPN1P07384 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CAPN1P07384 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms