Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AC092910.1-201ENST00000482027 1129 ntBASIC15.24■□□□□ 0.03
CNOT4O95628 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT4O95628 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.24■□□□□ 0.03
CNOT4O95628 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.24■□□□□ 0.03
CNOT4O95628 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT4O95628 AL691403.2-201ENST00000618460 490 ntBASIC15.24■□□□□ 0.03
CNOT4O95628 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT4O95628 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.24■□□□□ 0.03
CNOT4O95628 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT4O95628 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT4O95628 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CNOT4O95628 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.24■□□□□ 0.03
CNOT4O95628 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT4O95628 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.24■□□□□ 0.03
CNOT4O95628 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.24■□□□□ 0.03
CNOT4O95628 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CNOT4O95628 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT4O95628 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT4O95628 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT4O95628 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT4O95628 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNOT4O95628 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CNOT4O95628 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CNOT4O95628 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CNOT4O95628 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CNOT4O95628 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CNOT4O95628 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNOT4O95628 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNOT4O95628 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNOT4O95628 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC15.23■□□□□ 0.03
CNOT4O95628 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.23■□□□□ 0.03
CNOT4O95628 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNOT4O95628 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNOT4O95628 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CNOT4O95628 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNOT4O95628 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.23■□□□□ 0.03
CNOT4O95628 AC098831.1-202ENST00000438821 336 ntBASIC15.23■□□□□ 0.03
CNOT4O95628 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
CNOT4O95628 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.23■□□□□ 0.03
CNOT4O95628 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.23■□□□□ 0.03
CNOT4O95628 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.23■□□□□ 0.03
CNOT4O95628 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.23■□□□□ 0.03
CNOT4O95628 GGTLC5P-201ENST00000617623 998 ntBASIC15.23■□□□□ 0.03
CNOT4O95628 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CNOT4O95628 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC15.23■□□□□ 0.03
CNOT4O95628 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CNOT4O95628 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNOT4O95628 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNOT4O95628 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
CNOT4O95628 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CNOT4O95628 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CNOT4O95628 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNOT4O95628 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNOT4O95628 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CNOT4O95628 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CNOT4O95628 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNOT4O95628 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CNOT4O95628 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC15.22■□□□□ 0.03
CNOT4O95628 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNOT4O95628 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CNOT4O95628 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNOT4O95628 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
CNOT4O95628 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.22■□□□□ 0.03
CNOT4O95628 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNOT4O95628 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNOT4O95628 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CNOT4O95628 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
CNOT4O95628 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNOT4O95628 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.22■□□□□ 0.03
CNOT4O95628 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNOT4O95628 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.22■□□□□ 0.03
CNOT4O95628 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.22■□□□□ 0.03
CNOT4O95628 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.22■□□□□ 0.03
CNOT4O95628 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.22■□□□□ 0.03
CNOT4O95628 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CNOT4O95628 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CNOT4O95628 AC008667.4-201ENST00000607370 168 ntBASIC15.22■□□□□ 0.03
CNOT4O95628 Z83851.2-201ENST00000609564 659 ntBASIC15.22■□□□□ 0.03
CNOT4O95628 AC027601.4-201ENST00000611259 610 ntBASIC15.22■□□□□ 0.03
CNOT4O95628 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
CNOT4O95628 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CNOT4O95628 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CNOT4O95628 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
CNOT4O95628 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.22■□□□□ 0.03
CNOT4O95628 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.22■□□□□ 0.03
CNOT4O95628 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.22■□□□□ 0.03
CNOT4O95628 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
CNOT4O95628 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNOT4O95628 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNOT4O95628 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.22■□□□□ 0.03
CNOT4O95628 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CNOT4O95628 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CNOT4O95628 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CNOT4O95628 AC134043.2-201ENST00000624206 2238 ntBASIC15.21■□□□□ 0.03
CNOT4O95628 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CNOT4O95628 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CNOT4O95628 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CNOT4O95628 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CNOT4O95628 AP002414.3-201ENST00000589352 1468 ntBASIC15.21■□□□□ 0.03
CNOT4O95628 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms