Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLSTN1O94985 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLSTN1O94985 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CLSTN1O94985 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CLSTN1O94985 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLSTN1O94985 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19■□□□□ 0.63
CLSTN1O94985 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19■□□□□ 0.63
CLSTN1O94985 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLSTN1O94985 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19■□□□□ 0.63
CLSTN1O94985 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CLSTN1O94985 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19■□□□□ 0.63
CLSTN1O94985 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19■□□□□ 0.63
CLSTN1O94985 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLSTN1O94985 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLSTN1O94985 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLSTN1O94985 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLSTN1O94985 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLSTN1O94985 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLSTN1O94985 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLSTN1O94985 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.99■□□□□ 0.63
CLSTN1O94985 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLSTN1O94985 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLSTN1O94985 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLSTN1O94985 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLSTN1O94985 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.99■□□□□ 0.63
CLSTN1O94985 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLSTN1O94985 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CLSTN1O94985 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CLSTN1O94985 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLSTN1O94985 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
CLSTN1O94985 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLSTN1O94985 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLSTN1O94985 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLSTN1O94985 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.99■□□□□ 0.63
CLSTN1O94985 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.99■□□□□ 0.63
CLSTN1O94985 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.99■□□□□ 0.63
CLSTN1O94985 POM121L3P-201ENST00000419331 1163 ntBASIC18.99■□□□□ 0.63
CLSTN1O94985 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.99■□□□□ 0.63
CLSTN1O94985 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.99■□□□□ 0.63
CLSTN1O94985 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.99■□□□□ 0.63
CLSTN1O94985 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLSTN1O94985 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLSTN1O94985 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.99■□□□□ 0.63
CLSTN1O94985 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CLSTN1O94985 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CLSTN1O94985 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.99■□□□□ 0.63
CLSTN1O94985 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.99■□□□□ 0.63
CLSTN1O94985 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLSTN1O94985 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLSTN1O94985 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLSTN1O94985 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLSTN1O94985 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLSTN1O94985 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLSTN1O94985 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLSTN1O94985 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLSTN1O94985 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.98■□□□□ 0.63
CLSTN1O94985 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLSTN1O94985 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLSTN1O94985 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLSTN1O94985 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CLSTN1O94985 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.98■□□□□ 0.63
CLSTN1O94985 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.98■□□□□ 0.63
CLSTN1O94985 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.98■□□□□ 0.63
CLSTN1O94985 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.98■□□□□ 0.63
CLSTN1O94985 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.98■□□□□ 0.63
CLSTN1O94985 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC18.98■□□□□ 0.63
CLSTN1O94985 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLSTN1O94985 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLSTN1O94985 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLSTN1O94985 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.98■□□□□ 0.63
CLSTN1O94985 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLSTN1O94985 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLSTN1O94985 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC18.98■□□□□ 0.63
CLSTN1O94985 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.98■□□□□ 0.63
CLSTN1O94985 AC067930.6-201ENST00000623257 4947 ntBASIC18.98■□□□□ 0.63
CLSTN1O94985 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLSTN1O94985 AC097374.2-201ENST00000618617 1306 ntBASIC18.98■□□□□ 0.63
CLSTN1O94985 AP001094.4-201ENST00000579008 2176 ntBASIC18.98■□□□□ 0.63
CLSTN1O94985 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.98■□□□□ 0.63
CLSTN1O94985 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.97■□□□□ 0.63
CLSTN1O94985 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLSTN1O94985 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CLSTN1O94985 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.97■□□□□ 0.63
CLSTN1O94985 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.97■□□□□ 0.63
CLSTN1O94985 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLSTN1O94985 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CLSTN1O94985 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC18.97■□□□□ 0.63
CLSTN1O94985 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLSTN1O94985 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
CLSTN1O94985 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CLSTN1O94985 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.97■□□□□ 0.63
CLSTN1O94985 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLSTN1O94985 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLSTN1O94985 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLSTN1O94985 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLSTN1O94985 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLSTN1O94985 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.97■□□□□ 0.63
CLSTN1O94985 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CLSTN1O94985 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.97■□□□□ 0.63
CLSTN1O94985 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms