Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDKL5O76039 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDKL5O76039 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDKL5O76039 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDKL5O76039 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDKL5O76039 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC19.88■□□□□ 0.77
CDKL5O76039 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.88■□□□□ 0.77
CDKL5O76039 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDKL5O76039 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDKL5O76039 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
CDKL5O76039 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
CDKL5O76039 AC243591.1-201ENST00000452967 1364 ntBASIC19.88■□□□□ 0.77
CDKL5O76039 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.88■□□□□ 0.77
CDKL5O76039 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDKL5O76039 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.88■□□□□ 0.77
CDKL5O76039 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.88■□□□□ 0.77
CDKL5O76039 DUSP5P1-201ENST00000441325 1139 ntBASIC19.88■□□□□ 0.77
CDKL5O76039 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.88■□□□□ 0.77
CDKL5O76039 UNC93B7-201ENST00000509439 705 ntBASIC19.88■□□□□ 0.77
CDKL5O76039 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.88■□□□□ 0.77
CDKL5O76039 AC021087.4-201ENST00000563761 564 ntBASIC19.88■□□□□ 0.77
CDKL5O76039 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDKL5O76039 AC006557.2-201ENST00000592985 1240 ntBASIC19.88■□□□□ 0.77
CDKL5O76039 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.88■□□□□ 0.77
CDKL5O76039 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CDKL5O76039 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDKL5O76039 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CDKL5O76039 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDKL5O76039 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CDKL5O76039 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDKL5O76039 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDKL5O76039 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.88■□□□□ 0.77
CDKL5O76039 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
CDKL5O76039 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.88■□□□□ 0.77
CDKL5O76039 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CDKL5O76039 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC19.88■□□□□ 0.77
CDKL5O76039 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.88■□□□□ 0.77
CDKL5O76039 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.87■□□□□ 0.77
CDKL5O76039 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.87■□□□□ 0.77
CDKL5O76039 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.87■□□□□ 0.77
CDKL5O76039 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.87■□□□□ 0.77
CDKL5O76039 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.87■□□□□ 0.77
CDKL5O76039 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CDKL5O76039 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDKL5O76039 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDKL5O76039 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.87■□□□□ 0.77
CDKL5O76039 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.87■□□□□ 0.77
CDKL5O76039 AC073648.2-201ENST00000510116 352 ntBASIC19.87■□□□□ 0.77
CDKL5O76039 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDKL5O76039 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.87■□□□□ 0.77
CDKL5O76039 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.87■□□□□ 0.77
CDKL5O76039 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.87■□□□□ 0.77
CDKL5O76039 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.87■□□□□ 0.77
CDKL5O76039 TERC-201ENST00000602385 541 ntBASIC19.87■□□□□ 0.77
CDKL5O76039 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.87■□□□□ 0.77
CDKL5O76039 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDKL5O76039 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDKL5O76039 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDKL5O76039 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC19.87■□□□□ 0.77
CDKL5O76039 AC011676.5-201ENST00000624864 2660 ntBASIC19.87■□□□□ 0.77
CDKL5O76039 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDKL5O76039 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDKL5O76039 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.86■□□□□ 0.77
CDKL5O76039 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDKL5O76039 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDKL5O76039 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
CDKL5O76039 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.86■□□□□ 0.77
CDKL5O76039 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDKL5O76039 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CDKL5O76039 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
CDKL5O76039 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
CDKL5O76039 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.86■□□□□ 0.77
CDKL5O76039 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDKL5O76039 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDKL5O76039 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDKL5O76039 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC19.86■□□□□ 0.77
CDKL5O76039 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.86■□□□□ 0.77
CDKL5O76039 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.86■□□□□ 0.77
CDKL5O76039 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.86■□□□□ 0.77
CDKL5O76039 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.86■□□□□ 0.77
CDKL5O76039 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CDKL5O76039 AC107918.4-202ENST00000641623 219 ntBASIC19.86■□□□□ 0.77
CDKL5O76039 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDKL5O76039 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC19.86■□□□□ 0.77
CDKL5O76039 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.86■□□□□ 0.77
CDKL5O76039 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDKL5O76039 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDKL5O76039 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDKL5O76039 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
CDKL5O76039 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDKL5O76039 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CDKL5O76039 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CDKL5O76039 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDKL5O76039 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDKL5O76039 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CDKL5O76039 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDKL5O76039 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.85■□□□□ 0.77
CDKL5O76039 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC19.85■□□□□ 0.77
CDKL5O76039 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC19.85■□□□□ 0.77
CDKL5O76039 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms