Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC7.52□□□□□ -1.21
USH2AO75445 MIR33B-201ENST00000385104 96 ntBASIC7.52□□□□□ -1.21
USH2AO75445 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC7.52□□□□□ -1.21
USH2AO75445 AP000812.2-201ENST00000538934 718 ntBASIC7.52□□□□□ -1.21
USH2AO75445 AC105021.1-202ENST00000570572 669 ntBASIC7.52□□□□□ -1.21
USH2AO75445 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC7.52□□□□□ -1.21
USH2AO75445 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
USH2AO75445 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
USH2AO75445 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
USH2AO75445 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
USH2AO75445 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
USH2AO75445 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
USH2AO75445 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
USH2AO75445 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC7.52□□□□□ -1.21
USH2AO75445 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
USH2AO75445 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
USH2AO75445 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
USH2AO75445 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC7.52□□□□□ -1.21
USH2AO75445 MPV17-206ENST00000402722 827 ntTSL 3 BASIC7.52□□□□□ -1.21
USH2AO75445 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
USH2AO75445 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC7.52□□□□□ -1.21
USH2AO75445 DUTP2-201ENST00000519164 463 ntBASIC7.52□□□□□ -1.21
USH2AO75445 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC7.52□□□□□ -1.21
USH2AO75445 AC005412.3-201ENST00000580309 715 ntBASIC7.52□□□□□ -1.21
USH2AO75445 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
USH2AO75445 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
USH2AO75445 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC7.52□□□□□ -1.21
USH2AO75445 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC7.52□□□□□ -1.21
USH2AO75445 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
USH2AO75445 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
USH2AO75445 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC7.52□□□□□ -1.21
USH2AO75445 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
USH2AO75445 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
USH2AO75445 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
USH2AO75445 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
USH2AO75445 CALR4P-201ENST00000431943 946 ntBASIC7.52□□□□□ -1.21
USH2AO75445 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC7.52□□□□□ -1.21
USH2AO75445 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC7.52□□□□□ -1.21
USH2AO75445 TPRX2P-201ENST00000535362 881 ntBASIC7.52□□□□□ -1.21
USH2AO75445 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC7.52□□□□□ -1.21
USH2AO75445 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC7.52□□□□□ -1.21
USH2AO75445 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC7.52□□□□□ -1.21
USH2AO75445 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC7.52□□□□□ -1.21
USH2AO75445 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC7.52□□□□□ -1.21
USH2AO75445 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC7.52□□□□□ -1.21
USH2AO75445 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
USH2AO75445 AL096828.2-201ENST00000567259 1965 ntBASIC7.52□□□□□ -1.21
USH2AO75445 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
USH2AO75445 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
USH2AO75445 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC7.52□□□□□ -1.21
USH2AO75445 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
USH2AO75445 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
USH2AO75445 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC7.52□□□□□ -1.21
USH2AO75445 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
USH2AO75445 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
USH2AO75445 AC234644.1-201ENST00000406065 370 ntBASIC7.52□□□□□ -1.21
USH2AO75445 CENPM-206ENST00000407253 818 ntTSL 2 BASIC7.52□□□□□ -1.21
USH2AO75445 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC7.52□□□□□ -1.21
USH2AO75445 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC7.52□□□□□ -1.21
USH2AO75445 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC7.52□□□□□ -1.21
USH2AO75445 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC7.52□□□□□ -1.21
USH2AO75445 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC7.52□□□□□ -1.21
USH2AO75445 5S_rRNA.22-201ENST00000614916 106 ntBASIC7.52□□□□□ -1.21
USH2AO75445 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
USH2AO75445 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
USH2AO75445 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC7.51□□□□□ -1.21
USH2AO75445 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
USH2AO75445 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
USH2AO75445 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
USH2AO75445 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
USH2AO75445 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC7.51□□□□□ -1.21
USH2AO75445 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC7.51□□□□□ -1.21
USH2AO75445 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
USH2AO75445 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
USH2AO75445 NARF-206ENST00000457415 1668 ntTSL 5 BASIC7.51□□□□□ -1.21
USH2AO75445 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
USH2AO75445 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC7.51□□□□□ -1.21
USH2AO75445 AL627389.1-201ENST00000413508 1182 ntBASIC7.51□□□□□ -1.21
USH2AO75445 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC7.51□□□□□ -1.21
USH2AO75445 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC7.51□□□□□ -1.21
USH2AO75445 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC7.51□□□□□ -1.21
USH2AO75445 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
USH2AO75445 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC7.51□□□□□ -1.21
USH2AO75445 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
USH2AO75445 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC7.51□□□□□ -1.21
USH2AO75445 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
USH2AO75445 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
USH2AO75445 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC7.51□□□□□ -1.21
USH2AO75445 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC7.51□□□□□ -1.21
USH2AO75445 OSM-203ENST00000403463 464 ntTSL 3 BASIC7.51□□□□□ -1.21
USH2AO75445 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC7.51□□□□□ -1.21
USH2AO75445 NEU3-203ENST00000529024 581 ntTSL 3 BASIC7.51□□□□□ -1.21
USH2AO75445 AC123567.1-201ENST00000548294 1261 ntBASIC7.51□□□□□ -1.21
USH2AO75445 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC7.51□□□□□ -1.21
USH2AO75445 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC7.51□□□□□ -1.21
USH2AO75445 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC7.51□□□□□ -1.21
USH2AO75445 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
USH2AO75445 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC7.51□□□□□ -1.21
USH2AO75445 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
USH2AO75445 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms