Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.52■□□□□ 0.71
ATP2A1O14983 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
ATP2A1O14983 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.52■□□□□ 0.71
ATP2A1O14983 AC008764.6-201ENST00000595909 2069 ntBASIC19.52■□□□□ 0.71
ATP2A1O14983 AKAP8P1-201ENST00000434743 1349 ntBASIC19.51■□□□□ 0.71
ATP2A1O14983 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATP2A1O14983 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.51■□□□□ 0.71
ATP2A1O14983 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP2A1O14983 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC19.51■□□□□ 0.71
ATP2A1O14983 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
ATP2A1O14983 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.51■□□□□ 0.71
ATP2A1O14983 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATP2A1O14983 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATP2A1O14983 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATP2A1O14983 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.51■□□□□ 0.71
ATP2A1O14983 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP2A1O14983 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP2A1O14983 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP2A1O14983 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
ATP2A1O14983 SLC25A1P3-201ENST00000395415 828 ntBASIC19.51■□□□□ 0.71
ATP2A1O14983 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.51■□□□□ 0.71
ATP2A1O14983 AL627223.1-201ENST00000416693 442 ntBASIC19.51■□□□□ 0.71
ATP2A1O14983 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC19.51■□□□□ 0.71
ATP2A1O14983 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
ATP2A1O14983 AC009093.7-201ENST00000623853 1223 ntBASIC19.51■□□□□ 0.71
ATP2A1O14983 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP2A1O14983 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP2A1O14983 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
ATP2A1O14983 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP2A1O14983 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP2A1O14983 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP2A1O14983 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATP2A1O14983 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP2A1O14983 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP2A1O14983 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
ATP2A1O14983 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
ATP2A1O14983 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATP2A1O14983 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATP2A1O14983 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
ATP2A1O14983 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19.51■□□□□ 0.71
ATP2A1O14983 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
ATP2A1O14983 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP2A1O14983 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ATP2A1O14983 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP2A1O14983 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ATP2A1O14983 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
ATP2A1O14983 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP2A1O14983 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
ATP2A1O14983 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP2A1O14983 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP2A1O14983 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
ATP2A1O14983 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
ATP2A1O14983 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP2A1O14983 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP2A1O14983 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP2A1O14983 AL353732.1-201ENST00000569618 1459 ntBASIC19.5■□□□□ 0.71
ATP2A1O14983 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP2A1O14983 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
ATP2A1O14983 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ATP2A1O14983 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.5■□□□□ 0.71
ATP2A1O14983 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.5■□□□□ 0.71
ATP2A1O14983 RN7SL589P-201ENST00000481268 310 ntBASIC19.5■□□□□ 0.71
ATP2A1O14983 KRT8P48-201ENST00000515599 1220 ntBASIC19.5■□□□□ 0.71
ATP2A1O14983 AC109635.5-201ENST00000533593 962 ntBASIC19.5■□□□□ 0.71
ATP2A1O14983 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.5■□□□□ 0.71
ATP2A1O14983 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ATP2A1O14983 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.5■□□□□ 0.71
ATP2A1O14983 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ATP2A1O14983 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
ATP2A1O14983 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
ATP2A1O14983 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP2A1O14983 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
ATP2A1O14983 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP2A1O14983 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
ATP2A1O14983 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
ATP2A1O14983 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP2A1O14983 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ATP2A1O14983 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.49■□□□□ 0.71
ATP2A1O14983 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ATP2A1O14983 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP2A1O14983 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP2A1O14983 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP2A1O14983 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ATP2A1O14983 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ATP2A1O14983 TIMM8BP1-201ENST00000452384 211 ntBASIC19.49■□□□□ 0.71
ATP2A1O14983 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.49■□□□□ 0.71
ATP2A1O14983 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC19.49■□□□□ 0.71
ATP2A1O14983 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.49■□□□□ 0.71
ATP2A1O14983 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC19.49■□□□□ 0.71
ATP2A1O14983 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.49■□□□□ 0.71
ATP2A1O14983 RARRES2P8-201ENST00000566335 367 ntBASIC19.49■□□□□ 0.71
ATP2A1O14983 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.49■□□□□ 0.71
ATP2A1O14983 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.49■□□□□ 0.71
ATP2A1O14983 AC015911.4-201ENST00000588022 1070 ntBASIC19.49■□□□□ 0.71
ATP2A1O14983 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP2A1O14983 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP2A1O14983 AL161645.1-201ENST00000622716 1255 ntBASIC19.49■□□□□ 0.71
ATP2A1O14983 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.49■□□□□ 0.71
ATP2A1O14983 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
ATP2A1O14983 AC012569.1-201ENST00000591191 1524 ntBASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms