Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.31■□□□□ 0.36
AP3B1O00203 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.31■□□□□ 0.36
AP3B1O00203 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
AP3B1O00203 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
AP3B1O00203 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP3B1O00203 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP3B1O00203 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP3B1O00203 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP3B1O00203 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
AP3B1O00203 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
AP3B1O00203 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.3■□□□□ 0.36
AP3B1O00203 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP3B1O00203 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP3B1O00203 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
AP3B1O00203 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
AP3B1O00203 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP3B1O00203 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
AP3B1O00203 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
AP3B1O00203 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.3■□□□□ 0.36
AP3B1O00203 AL139288.1-201ENST00000623748 933 ntBASIC17.3■□□□□ 0.36
AP3B1O00203 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
AP3B1O00203 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP3B1O00203 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.3■□□□□ 0.36
AP3B1O00203 AC084018.2-201ENST00000613093 2607 ntBASIC17.3■□□□□ 0.36
AP3B1O00203 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.3■□□□□ 0.36
AP3B1O00203 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
AP3B1O00203 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP3B1O00203 NCF1C-201ENST00000438382 1427 ntBASIC17.3■□□□□ 0.36
AP3B1O00203 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3B1O00203 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3B1O00203 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
AP3B1O00203 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
AP3B1O00203 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3B1O00203 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AP3B1O00203 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.29■□□□□ 0.36
AP3B1O00203 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3B1O00203 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AP3B1O00203 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AP3B1O00203 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AP3B1O00203 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3B1O00203 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
AP3B1O00203 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3B1O00203 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3B1O00203 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
AP3B1O00203 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
AP3B1O00203 AP002414.1-201ENST00000391405 1147 ntBASIC17.29■□□□□ 0.36
AP3B1O00203 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
AP3B1O00203 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.29■□□□□ 0.36
AP3B1O00203 AC132008.2-207ENST00000454517 770 ntBASIC17.29■□□□□ 0.36
AP3B1O00203 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AP3B1O00203 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.29■□□□□ 0.36
AP3B1O00203 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
AP3B1O00203 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3B1O00203 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.29■□□□□ 0.36
AP3B1O00203 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AP3B1O00203 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.29■□□□□ 0.36
AP3B1O00203 AL022326.1-202ENST00000641533 845 ntBASIC17.29■□□□□ 0.36
AP3B1O00203 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3B1O00203 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3B1O00203 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
AP3B1O00203 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3B1O00203 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AP3B1O00203 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.29■□□□□ 0.36
AP3B1O00203 AL356309.3-201ENST00000624132 1934 ntBASIC17.29■□□□□ 0.36
AP3B1O00203 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AP3B1O00203 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3B1O00203 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
AP3B1O00203 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP3B1O00203 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP3B1O00203 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP3B1O00203 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP3B1O00203 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP3B1O00203 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.28■□□□□ 0.36
AP3B1O00203 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
AP3B1O00203 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP3B1O00203 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP3B1O00203 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AP3B1O00203 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AP3B1O00203 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AP3B1O00203 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.28■□□□□ 0.36
AP3B1O00203 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.28■□□□□ 0.36
AP3B1O00203 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AP3B1O00203 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AP3B1O00203 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AP3B1O00203 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AP3B1O00203 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.28■□□□□ 0.36
AP3B1O00203 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.28■□□□□ 0.36
AP3B1O00203 AC004817.3-201ENST00000602957 2129 ntBASIC17.28■□□□□ 0.36
AP3B1O00203 AC138894.3-201ENST00000603787 634 ntBASIC17.28■□□□□ 0.36
AP3B1O00203 AL121772.3-201ENST00000610840 674 ntBASIC17.28■□□□□ 0.36
AP3B1O00203 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.28■□□□□ 0.36
AP3B1O00203 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AP3B1O00203 AL118508.1-201ENST00000613502 2345 ntBASIC17.28■□□□□ 0.36
AP3B1O00203 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AP3B1O00203 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP3B1O00203 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.28■□□□□ 0.36
AP3B1O00203 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AP3B1O00203 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP3B1O00203 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP3B1O00203 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms