Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV5-3A0A0A0MS03 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV5-3A0A0A0MS03 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV5-3A0A0A0MS03 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV5-3A0A0A0MS03 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.01■□□□□ 0.15
TRBV5-3A0A0A0MS03 AC079328.2-201ENST00000561241 3354 ntBASIC16.01■□□□□ 0.15
TRBV5-3A0A0A0MS03 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV5-3A0A0A0MS03 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV5-3A0A0A0MS03 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
TRBV5-3A0A0A0MS03 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
TRBV5-3A0A0A0MS03 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV5-3A0A0A0MS03 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.01■□□□□ 0.15
TRBV5-3A0A0A0MS03 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.01■□□□□ 0.15
TRBV5-3A0A0A0MS03 FAM86EP-206ENST00000510506 987 ntBASIC16.01■□□□□ 0.15
TRBV5-3A0A0A0MS03 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.01■□□□□ 0.15
TRBV5-3A0A0A0MS03 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.01■□□□□ 0.15
TRBV5-3A0A0A0MS03 AC114341.1-201ENST00000618070 349 ntBASIC16.01■□□□□ 0.15
TRBV5-3A0A0A0MS03 AL139011.1-202ENST00000642063 584 ntBASIC16.01■□□□□ 0.15
TRBV5-3A0A0A0MS03 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV5-3A0A0A0MS03 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV5-3A0A0A0MS03 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV5-3A0A0A0MS03 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV5-3A0A0A0MS03 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV5-3A0A0A0MS03 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV5-3A0A0A0MS03 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.01■□□□□ 0.15
TRBV5-3A0A0A0MS03 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV5-3A0A0A0MS03 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV5-3A0A0A0MS03 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.01■□□□□ 0.15
TRBV5-3A0A0A0MS03 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.01■□□□□ 0.15
TRBV5-3A0A0A0MS03 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRBV5-3A0A0A0MS03 AL021920.2-201ENST00000624828 1351 ntBASIC16■□□□□ 0.15
TRBV5-3A0A0A0MS03 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
TRBV5-3A0A0A0MS03 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16■□□□□ 0.15
TRBV5-3A0A0A0MS03 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16■□□□□ 0.15
TRBV5-3A0A0A0MS03 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRBV5-3A0A0A0MS03 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16■□□□□ 0.15
TRBV5-3A0A0A0MS03 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
TRBV5-3A0A0A0MS03 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRBV5-3A0A0A0MS03 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRBV5-3A0A0A0MS03 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16■□□□□ 0.15
TRBV5-3A0A0A0MS03 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TRBV5-3A0A0A0MS03 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRBV5-3A0A0A0MS03 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRBV5-3A0A0A0MS03 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRBV5-3A0A0A0MS03 LINC00982-205ENST00000420957 435 ntBASIC16■□□□□ 0.15
TRBV5-3A0A0A0MS03 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16■□□□□ 0.15
TRBV5-3A0A0A0MS03 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16■□□□□ 0.15
TRBV5-3A0A0A0MS03 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16■□□□□ 0.15
TRBV5-3A0A0A0MS03 KRT17P6-201ENST00000453795 1220 ntBASIC16■□□□□ 0.15
TRBV5-3A0A0A0MS03 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
TRBV5-3A0A0A0MS03 AC096582.2-201ENST00000510860 516 ntBASIC16■□□□□ 0.15
TRBV5-3A0A0A0MS03 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16■□□□□ 0.15
TRBV5-3A0A0A0MS03 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16■□□□□ 0.15
TRBV5-3A0A0A0MS03 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16■□□□□ 0.15
TRBV5-3A0A0A0MS03 Z69720.1-201ENST00000601483 472 ntBASIC16■□□□□ 0.15
TRBV5-3A0A0A0MS03 AC116407.4-201ENST00000623319 1061 ntBASIC16■□□□□ 0.15
TRBV5-3A0A0A0MS03 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRBV5-3A0A0A0MS03 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16■□□□□ 0.15
TRBV5-3A0A0A0MS03 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16■□□□□ 0.15
TRBV5-3A0A0A0MS03 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRBV5-3A0A0A0MS03 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRBV5-3A0A0A0MS03 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRBV5-3A0A0A0MS03 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRBV5-3A0A0A0MS03 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16■□□□□ 0.15
TRBV5-3A0A0A0MS03 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRBV5-3A0A0A0MS03 KRT8P49-201ENST00000604166 1432 ntBASIC16■□□□□ 0.15
TRBV5-3A0A0A0MS03 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
TRBV5-3A0A0A0MS03 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16■□□□□ 0.15
TRBV5-3A0A0A0MS03 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16■□□□□ 0.15
TRBV5-3A0A0A0MS03 AC097637.2-201ENST00000624096 1997 ntBASIC16■□□□□ 0.15
TRBV5-3A0A0A0MS03 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRBV5-3A0A0A0MS03 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
TRBV5-3A0A0A0MS03 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRBV5-3A0A0A0MS03 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRBV5-3A0A0A0MS03 KRT18P1-202ENST00000452408 1331 ntBASIC15.99■□□□□ 0.15
TRBV5-3A0A0A0MS03 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRBV5-3A0A0A0MS03 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRBV5-3A0A0A0MS03 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRBV5-3A0A0A0MS03 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRBV5-3A0A0A0MS03 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
TRBV5-3A0A0A0MS03 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRBV5-3A0A0A0MS03 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRBV5-3A0A0A0MS03 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRBV5-3A0A0A0MS03 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRBV5-3A0A0A0MS03 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRBV5-3A0A0A0MS03 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRBV5-3A0A0A0MS03 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRBV5-3A0A0A0MS03 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRBV5-3A0A0A0MS03 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
TRBV5-3A0A0A0MS03 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.99■□□□□ 0.15
TRBV5-3A0A0A0MS03 TSSC2-201ENST00000450217 709 ntBASIC15.99■□□□□ 0.15
TRBV5-3A0A0A0MS03 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRBV5-3A0A0A0MS03 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.99■□□□□ 0.15
TRBV5-3A0A0A0MS03 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC15.99■□□□□ 0.15
TRBV5-3A0A0A0MS03 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
TRBV5-3A0A0A0MS03 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
TRBV5-3A0A0A0MS03 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.99■□□□□ 0.15
TRBV5-3A0A0A0MS03 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.99■□□□□ 0.15
TRBV5-3A0A0A0MS03 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRBV5-3A0A0A0MS03 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms