Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
DDX49Q9Y6V7 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDX49Q9Y6V7 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDX49Q9Y6V7 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
DDX49Q9Y6V7 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDX49Q9Y6V7 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
DDX49Q9Y6V7 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
DDX49Q9Y6V7 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDX49Q9Y6V7 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDX49Q9Y6V7 OS9-205ENST00000413095 1660 ntTSL 2 BASIC20.62■□□□□ 0.89
DDX49Q9Y6V7 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
DDX49Q9Y6V7 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
DDX49Q9Y6V7 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.62■□□□□ 0.89
DDX49Q9Y6V7 AL671883.3-201ENST00000603274 991 ntBASIC20.62■□□□□ 0.89
DDX49Q9Y6V7 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
DDX49Q9Y6V7 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.62■□□□□ 0.89
DDX49Q9Y6V7 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDX49Q9Y6V7 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDX49Q9Y6V7 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
DDX49Q9Y6V7 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
DDX49Q9Y6V7 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
DDX49Q9Y6V7 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDX49Q9Y6V7 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
DDX49Q9Y6V7 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.62■□□□□ 0.89
DDX49Q9Y6V7 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
DDX49Q9Y6V7 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDX49Q9Y6V7 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC20.62■□□□□ 0.89
DDX49Q9Y6V7 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC20.61■□□□□ 0.89
DDX49Q9Y6V7 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC20.61■□□□□ 0.89
DDX49Q9Y6V7 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.61■□□□□ 0.89
DDX49Q9Y6V7 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC20.61■□□□□ 0.89
DDX49Q9Y6V7 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
DDX49Q9Y6V7 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
DDX49Q9Y6V7 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDX49Q9Y6V7 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC20.61■□□□□ 0.89
DDX49Q9Y6V7 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
DDX49Q9Y6V7 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDX49Q9Y6V7 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDX49Q9Y6V7 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC20.61■□□□□ 0.89
DDX49Q9Y6V7 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDX49Q9Y6V7 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDX49Q9Y6V7 AC132008.2-207ENST00000454517 770 ntBASIC20.61■□□□□ 0.89
DDX49Q9Y6V7 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDX49Q9Y6V7 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.61■□□□□ 0.89
DDX49Q9Y6V7 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
DDX49Q9Y6V7 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
DDX49Q9Y6V7 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDX49Q9Y6V7 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.61■□□□□ 0.89
DDX49Q9Y6V7 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC20.61■□□□□ 0.89
DDX49Q9Y6V7 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDX49Q9Y6V7 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
DDX49Q9Y6V7 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
DDX49Q9Y6V7 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDX49Q9Y6V7 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.61■□□□□ 0.89
DDX49Q9Y6V7 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC20.61■□□□□ 0.89
DDX49Q9Y6V7 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDX49Q9Y6V7 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC20.61■□□□□ 0.89
DDX49Q9Y6V7 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.61■□□□□ 0.89
DDX49Q9Y6V7 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
DDX49Q9Y6V7 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDX49Q9Y6V7 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
DDX49Q9Y6V7 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDX49Q9Y6V7 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DDX49Q9Y6V7 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DDX49Q9Y6V7 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.6■□□□□ 0.89
DDX49Q9Y6V7 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDX49Q9Y6V7 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DDX49Q9Y6V7 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDX49Q9Y6V7 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
DDX49Q9Y6V7 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDX49Q9Y6V7 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDX49Q9Y6V7 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DDX49Q9Y6V7 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDX49Q9Y6V7 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDX49Q9Y6V7 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.6■□□□□ 0.89
DDX49Q9Y6V7 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDX49Q9Y6V7 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDX49Q9Y6V7 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.6■□□□□ 0.89
DDX49Q9Y6V7 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.6■□□□□ 0.89
DDX49Q9Y6V7 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.6■□□□□ 0.89
DDX49Q9Y6V7 AL591684.3-201ENST00000605187 298 ntBASIC20.6■□□□□ 0.89
DDX49Q9Y6V7 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.6■□□□□ 0.89
DDX49Q9Y6V7 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
DDX49Q9Y6V7 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DDX49Q9Y6V7 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DDX49Q9Y6V7 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DDX49Q9Y6V7 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DDX49Q9Y6V7 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.6■□□□□ 0.89
DDX49Q9Y6V7 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DDX49Q9Y6V7 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDX49Q9Y6V7 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
DDX49Q9Y6V7 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
DDX49Q9Y6V7 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
DDX49Q9Y6V7 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DDX49Q9Y6V7 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC20.59■□□□□ 0.89
DDX49Q9Y6V7 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
DDX49Q9Y6V7 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
DDX49Q9Y6V7 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.59■□□□□ 0.89
DDX49Q9Y6V7 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
DDX49Q9Y6V7 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms