Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PHRF1Q9P1Y6 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC22.55■■□□□ 1.2
PHRF1Q9P1Y6 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC22.55■■□□□ 1.2
PHRF1Q9P1Y6 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PHRF1Q9P1Y6 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
PHRF1Q9P1Y6 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC22.55■■□□□ 1.2
PHRF1Q9P1Y6 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
PHRF1Q9P1Y6 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PHRF1Q9P1Y6 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
PHRF1Q9P1Y6 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
PHRF1Q9P1Y6 GPR53P-205ENST00000457298 1084 ntBASIC22.55■■□□□ 1.2
PHRF1Q9P1Y6 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PHRF1Q9P1Y6 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PHRF1Q9P1Y6 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC22.55■■□□□ 1.2
PHRF1Q9P1Y6 ZNF890P-202ENST00000530367 1156 ntBASIC22.55■■□□□ 1.2
PHRF1Q9P1Y6 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC22.55■■□□□ 1.2
PHRF1Q9P1Y6 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC22.55■■□□□ 1.2
PHRF1Q9P1Y6 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PHRF1Q9P1Y6 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC22.55■■□□□ 1.2
PHRF1Q9P1Y6 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC22.55■■□□□ 1.2
PHRF1Q9P1Y6 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PHRF1Q9P1Y6 SIGLEC29P-201ENST00000599873 1114 ntBASIC22.55■■□□□ 1.2
PHRF1Q9P1Y6 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC22.55■■□□□ 1.2
PHRF1Q9P1Y6 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC22.55■■□□□ 1.2
PHRF1Q9P1Y6 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PHRF1Q9P1Y6 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
PHRF1Q9P1Y6 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC22.55■■□□□ 1.2
PHRF1Q9P1Y6 AC008764.6-201ENST00000595909 2069 ntBASIC22.55■■□□□ 1.2
PHRF1Q9P1Y6 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
PHRF1Q9P1Y6 FRMD8P1-201ENST00000440433 1524 ntBASIC22.55■■□□□ 1.2
PHRF1Q9P1Y6 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC22.55■■□□□ 1.2
PHRF1Q9P1Y6 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PHRF1Q9P1Y6 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
PHRF1Q9P1Y6 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PHRF1Q9P1Y6 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
PHRF1Q9P1Y6 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC22.54■■□□□ 1.2
PHRF1Q9P1Y6 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC22.54■■□□□ 1.2
PHRF1Q9P1Y6 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC22.54■■□□□ 1.2
PHRF1Q9P1Y6 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC22.54■■□□□ 1.2
PHRF1Q9P1Y6 SPDYE18-201ENST00000510091 1050 ntBASIC22.54■■□□□ 1.2
PHRF1Q9P1Y6 AC016396.2-201ENST00000562575 1417 ntBASIC22.54■■□□□ 1.2
PHRF1Q9P1Y6 SSH2-210ENST00000582084 560 ntTSL 3 BASIC22.54■■□□□ 1.2
PHRF1Q9P1Y6 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC22.54■■□□□ 1.2
PHRF1Q9P1Y6 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PHRF1Q9P1Y6 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PHRF1Q9P1Y6 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
PHRF1Q9P1Y6 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
PHRF1Q9P1Y6 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC22.54■■□□□ 1.2
PHRF1Q9P1Y6 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC22.54■■□□□ 1.2
PHRF1Q9P1Y6 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC22.54■■□□□ 1.2
PHRF1Q9P1Y6 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PHRF1Q9P1Y6 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC22.54■■□□□ 1.2
PHRF1Q9P1Y6 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PHRF1Q9P1Y6 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
PHRF1Q9P1Y6 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC22.53■■□□□ 1.2
PHRF1Q9P1Y6 MIR1909-201ENST00000411312 80 ntBASIC22.53■■□□□ 1.2
PHRF1Q9P1Y6 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC22.53■■□□□ 1.2
PHRF1Q9P1Y6 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC22.53■■□□□ 1.2
PHRF1Q9P1Y6 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC22.53■■□□□ 1.2
PHRF1Q9P1Y6 AC009407.1-201ENST00000568958 598 ntBASIC22.53■■□□□ 1.2
PHRF1Q9P1Y6 TP53TG3HP-202ENST00000569755 579 ntBASIC22.53■■□□□ 1.2
PHRF1Q9P1Y6 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PHRF1Q9P1Y6 CETN4P-206ENST00000642099 2168 ntBASIC22.53■■□□□ 1.2
PHRF1Q9P1Y6 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PHRF1Q9P1Y6 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC22.53■■□□□ 1.2
PHRF1Q9P1Y6 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC22.53■■□□□ 1.2
PHRF1Q9P1Y6 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PHRF1Q9P1Y6 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC22.53■■□□□ 1.2
PHRF1Q9P1Y6 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC22.53■■□□□ 1.2
PHRF1Q9P1Y6 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PHRF1Q9P1Y6 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC22.53■■□□□ 1.2
PHRF1Q9P1Y6 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PHRF1Q9P1Y6 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC22.53■■□□□ 1.2
PHRF1Q9P1Y6 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
PHRF1Q9P1Y6 AC021097.1-201ENST00000607902 574 ntBASIC22.53■■□□□ 1.2
PHRF1Q9P1Y6 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC22.53■■□□□ 1.2
PHRF1Q9P1Y6 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PHRF1Q9P1Y6 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC22.52■■□□□ 1.2
PHRF1Q9P1Y6 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC22.52■■□□□ 1.2
PHRF1Q9P1Y6 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
PHRF1Q9P1Y6 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PHRF1Q9P1Y6 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC22.52■■□□□ 1.2
PHRF1Q9P1Y6 AC093525.9-201ENST00000624961 1746 ntBASIC22.52■■□□□ 1.2
PHRF1Q9P1Y6 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
PHRF1Q9P1Y6 CENPM-206ENST00000407253 818 ntTSL 2 BASIC22.52■■□□□ 1.2
PHRF1Q9P1Y6 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC22.52■■□□□ 1.2
PHRF1Q9P1Y6 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
PHRF1Q9P1Y6 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC22.52■■□□□ 1.2
PHRF1Q9P1Y6 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC22.52■■□□□ 1.2
PHRF1Q9P1Y6 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC22.52■■□□□ 1.2
PHRF1Q9P1Y6 ARL16-202ENST00000570561 768 ntTSL 2 BASIC22.52■■□□□ 1.2
PHRF1Q9P1Y6 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
PHRF1Q9P1Y6 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PHRF1Q9P1Y6 AL133215.2-201ENST00000609242 977 ntBASIC22.52■■□□□ 1.2
PHRF1Q9P1Y6 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC22.52■■□□□ 1.2
PHRF1Q9P1Y6 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
PHRF1Q9P1Y6 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
PHRF1Q9P1Y6 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
PHRF1Q9P1Y6 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PHRF1Q9P1Y6 KRT8P49-201ENST00000604166 1432 ntBASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms