Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.37■□□□□ 0.37
NCKIPSDQ9NZQ3 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.37■□□□□ 0.37
NCKIPSDQ9NZQ3 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NCKIPSDQ9NZQ3 AC016396.2-201ENST00000562575 1417 ntBASIC17.37■□□□□ 0.37
NCKIPSDQ9NZQ3 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
NCKIPSDQ9NZQ3 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
NCKIPSDQ9NZQ3 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NCKIPSDQ9NZQ3 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NCKIPSDQ9NZQ3 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.37■□□□□ 0.37
NCKIPSDQ9NZQ3 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NCKIPSDQ9NZQ3 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NCKIPSDQ9NZQ3 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NCKIPSDQ9NZQ3 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
NCKIPSDQ9NZQ3 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
NCKIPSDQ9NZQ3 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
NCKIPSDQ9NZQ3 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NCKIPSDQ9NZQ3 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NCKIPSDQ9NZQ3 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NCKIPSDQ9NZQ3 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NCKIPSDQ9NZQ3 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NCKIPSDQ9NZQ3 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
NCKIPSDQ9NZQ3 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.36■□□□□ 0.37
NCKIPSDQ9NZQ3 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.36■□□□□ 0.37
NCKIPSDQ9NZQ3 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.36■□□□□ 0.37
NCKIPSDQ9NZQ3 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NCKIPSDQ9NZQ3 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NCKIPSDQ9NZQ3 AC092865.5-201ENST00000545435 363 ntBASIC17.36■□□□□ 0.37
NCKIPSDQ9NZQ3 SART3-203ENST00000546611 1184 ntBASIC17.36■□□□□ 0.37
NCKIPSDQ9NZQ3 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.36■□□□□ 0.37
NCKIPSDQ9NZQ3 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.36■□□□□ 0.37
NCKIPSDQ9NZQ3 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
NCKIPSDQ9NZQ3 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NCKIPSDQ9NZQ3 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NCKIPSDQ9NZQ3 AL049840.3-201ENST00000602669 611 ntBASIC17.36■□□□□ 0.37
NCKIPSDQ9NZQ3 AC027601.4-201ENST00000611259 610 ntBASIC17.36■□□□□ 0.37
NCKIPSDQ9NZQ3 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NCKIPSDQ9NZQ3 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NCKIPSDQ9NZQ3 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NCKIPSDQ9NZQ3 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NCKIPSDQ9NZQ3 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NCKIPSDQ9NZQ3 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NCKIPSDQ9NZQ3 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NCKIPSDQ9NZQ3 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NCKIPSDQ9NZQ3 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.35■□□□□ 0.37
NCKIPSDQ9NZQ3 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NCKIPSDQ9NZQ3 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.35■□□□□ 0.37
NCKIPSDQ9NZQ3 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
NCKIPSDQ9NZQ3 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.35■□□□□ 0.37
NCKIPSDQ9NZQ3 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NCKIPSDQ9NZQ3 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
NCKIPSDQ9NZQ3 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
NCKIPSDQ9NZQ3 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NCKIPSDQ9NZQ3 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NCKIPSDQ9NZQ3 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.35■□□□□ 0.37
NCKIPSDQ9NZQ3 MIR1233-2-201ENST00000408138 82 ntBASIC17.35■□□□□ 0.37
NCKIPSDQ9NZQ3 MIR1233-1-201ENST00000408722 82 ntBASIC17.35■□□□□ 0.37
NCKIPSDQ9NZQ3 BX842568.4-201ENST00000421222 227 ntBASIC17.35■□□□□ 0.37
NCKIPSDQ9NZQ3 POLD2P1-201ENST00000511220 997 ntBASIC17.35■□□□□ 0.37
NCKIPSDQ9NZQ3 IGHV3-22-201ENST00000520721 359 ntBASIC17.35■□□□□ 0.37
NCKIPSDQ9NZQ3 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.35■□□□□ 0.37
NCKIPSDQ9NZQ3 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
NCKIPSDQ9NZQ3 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NCKIPSDQ9NZQ3 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.35■□□□□ 0.37
NCKIPSDQ9NZQ3 FAM197Y3-203ENST00000618346 717 ntBASIC17.35■□□□□ 0.37
NCKIPSDQ9NZQ3 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.35■□□□□ 0.37
NCKIPSDQ9NZQ3 AC008735.5-201ENST00000623544 497 ntBASIC17.35■□□□□ 0.37
NCKIPSDQ9NZQ3 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
NCKIPSDQ9NZQ3 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NCKIPSDQ9NZQ3 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
NCKIPSDQ9NZQ3 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.35■□□□□ 0.37
NCKIPSDQ9NZQ3 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.35■□□□□ 0.37
NCKIPSDQ9NZQ3 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NCKIPSDQ9NZQ3 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NCKIPSDQ9NZQ3 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NCKIPSDQ9NZQ3 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NCKIPSDQ9NZQ3 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NCKIPSDQ9NZQ3 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.35■□□□□ 0.37
NCKIPSDQ9NZQ3 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NCKIPSDQ9NZQ3 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
NCKIPSDQ9NZQ3 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
NCKIPSDQ9NZQ3 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NCKIPSDQ9NZQ3 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NCKIPSDQ9NZQ3 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NCKIPSDQ9NZQ3 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
NCKIPSDQ9NZQ3 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NCKIPSDQ9NZQ3 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NCKIPSDQ9NZQ3 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NCKIPSDQ9NZQ3 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NCKIPSDQ9NZQ3 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NCKIPSDQ9NZQ3 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
NCKIPSDQ9NZQ3 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.34■□□□□ 0.37
NCKIPSDQ9NZQ3 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
NCKIPSDQ9NZQ3 RPS2P1-201ENST00000434010 821 ntBASIC17.34■□□□□ 0.37
NCKIPSDQ9NZQ3 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.34■□□□□ 0.37
NCKIPSDQ9NZQ3 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
NCKIPSDQ9NZQ3 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
NCKIPSDQ9NZQ3 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.34■□□□□ 0.37
NCKIPSDQ9NZQ3 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.34■□□□□ 0.37
NCKIPSDQ9NZQ3 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.34■□□□□ 0.37
NCKIPSDQ9NZQ3 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms