Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.59■□□□□ 0.25
CUEDC1Q9NWM3 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CUEDC1Q9NWM3 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.59■□□□□ 0.25
CUEDC1Q9NWM3 AC012640.2-201ENST00000561606 901 ntBASIC16.59■□□□□ 0.25
CUEDC1Q9NWM3 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.59■□□□□ 0.25
CUEDC1Q9NWM3 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CUEDC1Q9NWM3 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.59■□□□□ 0.25
CUEDC1Q9NWM3 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CUEDC1Q9NWM3 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.59■□□□□ 0.25
CUEDC1Q9NWM3 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.59■□□□□ 0.25
CUEDC1Q9NWM3 AC004706.3-202ENST00000621574 984 ntBASIC16.59■□□□□ 0.25
CUEDC1Q9NWM3 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.59■□□□□ 0.25
CUEDC1Q9NWM3 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CUEDC1Q9NWM3 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CUEDC1Q9NWM3 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CUEDC1Q9NWM3 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.59■□□□□ 0.25
CUEDC1Q9NWM3 AC080080.1-201ENST00000625121 2420 ntBASIC16.59■□□□□ 0.25
CUEDC1Q9NWM3 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CUEDC1Q9NWM3 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CUEDC1Q9NWM3 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CUEDC1Q9NWM3 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CUEDC1Q9NWM3 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CUEDC1Q9NWM3 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CUEDC1Q9NWM3 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CUEDC1Q9NWM3 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.25
CUEDC1Q9NWM3 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.58■□□□□ 0.25
CUEDC1Q9NWM3 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
CUEDC1Q9NWM3 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CUEDC1Q9NWM3 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CUEDC1Q9NWM3 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
CUEDC1Q9NWM3 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
CUEDC1Q9NWM3 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.58■□□□□ 0.25
CUEDC1Q9NWM3 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CUEDC1Q9NWM3 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CUEDC1Q9NWM3 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.58■□□□□ 0.24
CUEDC1Q9NWM3 ELK2BP-201ENST00000415014 1224 ntBASIC16.58■□□□□ 0.24
CUEDC1Q9NWM3 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CUEDC1Q9NWM3 HMGN1P19-201ENST00000436976 333 ntBASIC16.58■□□□□ 0.24
CUEDC1Q9NWM3 POLD2P1-201ENST00000511220 997 ntBASIC16.58■□□□□ 0.24
CUEDC1Q9NWM3 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.58■□□□□ 0.24
CUEDC1Q9NWM3 MIR7706-201ENST00000613747 67 ntBASIC16.58■□□□□ 0.24
CUEDC1Q9NWM3 FAM215A-202ENST00000632077 792 ntBASIC16.58■□□□□ 0.24
CUEDC1Q9NWM3 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CUEDC1Q9NWM3 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
CUEDC1Q9NWM3 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.58■□□□□ 0.24
CUEDC1Q9NWM3 ZNF259P1-201ENST00000407656 1365 ntBASIC16.58■□□□□ 0.24
CUEDC1Q9NWM3 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CUEDC1Q9NWM3 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CUEDC1Q9NWM3 AC006504.4-201ENST00000592118 1568 ntBASIC16.58■□□□□ 0.24
CUEDC1Q9NWM3 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CUEDC1Q9NWM3 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CUEDC1Q9NWM3 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.58■□□□□ 0.24
CUEDC1Q9NWM3 AC092053.1-201ENST00000605787 1936 ntBASIC16.58■□□□□ 0.24
CUEDC1Q9NWM3 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CUEDC1Q9NWM3 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CUEDC1Q9NWM3 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.58■□□□□ 0.24
CUEDC1Q9NWM3 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.58■□□□□ 0.24
CUEDC1Q9NWM3 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CUEDC1Q9NWM3 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CUEDC1Q9NWM3 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CUEDC1Q9NWM3 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CUEDC1Q9NWM3 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CUEDC1Q9NWM3 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CUEDC1Q9NWM3 FER1L4-210ENST00000615531 5998 ntBASIC16.58■□□□□ 0.24
CUEDC1Q9NWM3 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CUEDC1Q9NWM3 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CUEDC1Q9NWM3 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CUEDC1Q9NWM3 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CUEDC1Q9NWM3 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CUEDC1Q9NWM3 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CUEDC1Q9NWM3 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CUEDC1Q9NWM3 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.57■□□□□ 0.24
CUEDC1Q9NWM3 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CUEDC1Q9NWM3 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CUEDC1Q9NWM3 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CUEDC1Q9NWM3 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CUEDC1Q9NWM3 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CUEDC1Q9NWM3 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CUEDC1Q9NWM3 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CUEDC1Q9NWM3 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CUEDC1Q9NWM3 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.57■□□□□ 0.24
CUEDC1Q9NWM3 LINC02012-201ENST00000608206 1725 ntBASIC16.57■□□□□ 0.24
CUEDC1Q9NWM3 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CUEDC1Q9NWM3 AL590787.1-201ENST00000568856 1315 ntBASIC16.57■□□□□ 0.24
CUEDC1Q9NWM3 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.57■□□□□ 0.24
CUEDC1Q9NWM3 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.57■□□□□ 0.24
CUEDC1Q9NWM3 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CUEDC1Q9NWM3 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CUEDC1Q9NWM3 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.57■□□□□ 0.24
CUEDC1Q9NWM3 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.57■□□□□ 0.24
CUEDC1Q9NWM3 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.57■□□□□ 0.24
CUEDC1Q9NWM3 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.57■□□□□ 0.24
CUEDC1Q9NWM3 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.57■□□□□ 0.24
CUEDC1Q9NWM3 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.57■□□□□ 0.24
CUEDC1Q9NWM3 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.57■□□□□ 0.24
CUEDC1Q9NWM3 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
CUEDC1Q9NWM3 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.57■□□□□ 0.24
CUEDC1Q9NWM3 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.57■□□□□ 0.24
CUEDC1Q9NWM3 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.57■□□□□ 0.24
CUEDC1Q9NWM3 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms