Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
CD248Q9HCU0 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
CD248Q9HCU0 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC18.08■□□□□ 0.48
CD248Q9HCU0 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.08■□□□□ 0.48
CD248Q9HCU0 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
CD248Q9HCU0 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CD248Q9HCU0 AL023806.1-201ENST00000603994 1649 ntBASIC18.08■□□□□ 0.48
CD248Q9HCU0 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CD248Q9HCU0 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.08■□□□□ 0.48
CD248Q9HCU0 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD248Q9HCU0 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.07■□□□□ 0.48
CD248Q9HCU0 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD248Q9HCU0 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.07■□□□□ 0.48
CD248Q9HCU0 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
CD248Q9HCU0 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD248Q9HCU0 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.07■□□□□ 0.48
CD248Q9HCU0 AC097374.2-201ENST00000618617 1306 ntBASIC18.07■□□□□ 0.48
CD248Q9HCU0 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD248Q9HCU0 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CD248Q9HCU0 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CD248Q9HCU0 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CD248Q9HCU0 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CD248Q9HCU0 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CD248Q9HCU0 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.07■□□□□ 0.48
CD248Q9HCU0 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CD248Q9HCU0 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.07■□□□□ 0.48
CD248Q9HCU0 AC145285.3-201ENST00000564603 959 ntBASIC18.07■□□□□ 0.48
CD248Q9HCU0 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.07■□□□□ 0.48
CD248Q9HCU0 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.07■□□□□ 0.48
CD248Q9HCU0 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD248Q9HCU0 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.07■□□□□ 0.48
CD248Q9HCU0 AP000867.4-201ENST00000641616 219 ntBASIC18.07■□□□□ 0.48
CD248Q9HCU0 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD248Q9HCU0 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD248Q9HCU0 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.07■□□□□ 0.48
CD248Q9HCU0 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CD248Q9HCU0 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD248Q9HCU0 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD248Q9HCU0 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD248Q9HCU0 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD248Q9HCU0 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD248Q9HCU0 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CD248Q9HCU0 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CD248Q9HCU0 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD248Q9HCU0 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC18.06■□□□□ 0.48
CD248Q9HCU0 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CD248Q9HCU0 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
CD248Q9HCU0 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.06■□□□□ 0.48
CD248Q9HCU0 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CD248Q9HCU0 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.06■□□□□ 0.48
CD248Q9HCU0 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.06■□□□□ 0.48
CD248Q9HCU0 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CD248Q9HCU0 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CD248Q9HCU0 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CD248Q9HCU0 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CD248Q9HCU0 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CD248Q9HCU0 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CD248Q9HCU0 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CD248Q9HCU0 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.06■□□□□ 0.48
CD248Q9HCU0 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.06■□□□□ 0.48
CD248Q9HCU0 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CD248Q9HCU0 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CD248Q9HCU0 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.06■□□□□ 0.48
CD248Q9HCU0 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.06■□□□□ 0.48
CD248Q9HCU0 POLD2P1-201ENST00000511220 997 ntBASIC18.06■□□□□ 0.48
CD248Q9HCU0 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CD248Q9HCU0 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.06■□□□□ 0.48
CD248Q9HCU0 AC012640.2-201ENST00000561606 901 ntBASIC18.06■□□□□ 0.48
CD248Q9HCU0 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.06■□□□□ 0.48
CD248Q9HCU0 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.06■□□□□ 0.48
CD248Q9HCU0 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.06■□□□□ 0.48
CD248Q9HCU0 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
CD248Q9HCU0 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CD248Q9HCU0 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CD248Q9HCU0 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CD248Q9HCU0 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CD248Q9HCU0 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
CD248Q9HCU0 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CD248Q9HCU0 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CD248Q9HCU0 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CD248Q9HCU0 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CD248Q9HCU0 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CD248Q9HCU0 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.05■□□□□ 0.48
CD248Q9HCU0 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CD248Q9HCU0 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.05■□□□□ 0.48
CD248Q9HCU0 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CD248Q9HCU0 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CD248Q9HCU0 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.05■□□□□ 0.48
CD248Q9HCU0 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC18.05■□□□□ 0.48
CD248Q9HCU0 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.05■□□□□ 0.48
CD248Q9HCU0 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CD248Q9HCU0 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.05■□□□□ 0.48
CD248Q9HCU0 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CD248Q9HCU0 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CD248Q9HCU0 RPS2P1-201ENST00000434010 821 ntBASIC18.05■□□□□ 0.48
CD248Q9HCU0 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.05■□□□□ 0.48
CD248Q9HCU0 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CD248Q9HCU0 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.05■□□□□ 0.48
CD248Q9HCU0 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CD248Q9HCU0 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms