Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.66■□□□□ 0.42
USP29Q9HBJ7 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP29Q9HBJ7 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.66■□□□□ 0.42
USP29Q9HBJ7 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
USP29Q9HBJ7 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.66■□□□□ 0.42
USP29Q9HBJ7 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.66■□□□□ 0.42
USP29Q9HBJ7 ABCD1P5-201ENST00000445663 754 ntBASIC17.66■□□□□ 0.42
USP29Q9HBJ7 FAM197Y8-203ENST00000450145 560 ntBASIC17.66■□□□□ 0.42
USP29Q9HBJ7 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.66■□□□□ 0.42
USP29Q9HBJ7 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.66■□□□□ 0.42
USP29Q9HBJ7 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.66■□□□□ 0.42
USP29Q9HBJ7 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
USP29Q9HBJ7 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.66■□□□□ 0.42
USP29Q9HBJ7 AC008894.3-201ENST00000624324 3103 ntBASIC17.66■□□□□ 0.42
USP29Q9HBJ7 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
USP29Q9HBJ7 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.66■□□□□ 0.42
USP29Q9HBJ7 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP29Q9HBJ7 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP29Q9HBJ7 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.66■□□□□ 0.42
USP29Q9HBJ7 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP29Q9HBJ7 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP29Q9HBJ7 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
USP29Q9HBJ7 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.65■□□□□ 0.42
USP29Q9HBJ7 SIGLEC16-201ENST00000599858 1437 ntBASIC17.65■□□□□ 0.42
USP29Q9HBJ7 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP29Q9HBJ7 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP29Q9HBJ7 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
USP29Q9HBJ7 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP29Q9HBJ7 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP29Q9HBJ7 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP29Q9HBJ7 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
USP29Q9HBJ7 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
USP29Q9HBJ7 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.65■□□□□ 0.42
USP29Q9HBJ7 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
USP29Q9HBJ7 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
USP29Q9HBJ7 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.65■□□□□ 0.42
USP29Q9HBJ7 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP29Q9HBJ7 AL020989.1-201ENST00000422979 469 ntBASIC17.65■□□□□ 0.42
USP29Q9HBJ7 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.65■□□□□ 0.42
USP29Q9HBJ7 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.65■□□□□ 0.42
USP29Q9HBJ7 SIGLEC30P-201ENST00000455569 941 ntBASIC17.65■□□□□ 0.42
USP29Q9HBJ7 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.65■□□□□ 0.42
USP29Q9HBJ7 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
USP29Q9HBJ7 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.65■□□□□ 0.42
USP29Q9HBJ7 AC073592.4-201ENST00000623827 446 ntBASIC17.65■□□□□ 0.42
USP29Q9HBJ7 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP29Q9HBJ7 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP29Q9HBJ7 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP29Q9HBJ7 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
USP29Q9HBJ7 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP29Q9HBJ7 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP29Q9HBJ7 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP29Q9HBJ7 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.65■□□□□ 0.42
USP29Q9HBJ7 AC018695.7-201ENST00000624587 2492 ntBASIC17.65■□□□□ 0.42
USP29Q9HBJ7 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
USP29Q9HBJ7 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP29Q9HBJ7 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
USP29Q9HBJ7 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
USP29Q9HBJ7 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.65■□□□□ 0.42
USP29Q9HBJ7 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
USP29Q9HBJ7 AC004817.3-201ENST00000602957 2129 ntBASIC17.65■□□□□ 0.42
USP29Q9HBJ7 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP29Q9HBJ7 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
USP29Q9HBJ7 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
USP29Q9HBJ7 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
USP29Q9HBJ7 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
USP29Q9HBJ7 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP29Q9HBJ7 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.64■□□□□ 0.41
USP29Q9HBJ7 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.64■□□□□ 0.41
USP29Q9HBJ7 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP29Q9HBJ7 PCDHA14-201ENST00000506751 2298 ntBASIC17.64■□□□□ 0.41
USP29Q9HBJ7 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
USP29Q9HBJ7 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
USP29Q9HBJ7 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
USP29Q9HBJ7 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
USP29Q9HBJ7 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.64■□□□□ 0.41
USP29Q9HBJ7 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP29Q9HBJ7 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.64■□□□□ 0.41
USP29Q9HBJ7 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP29Q9HBJ7 RBM17P3-201ENST00000417687 1192 ntBASIC17.64■□□□□ 0.41
USP29Q9HBJ7 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
USP29Q9HBJ7 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
USP29Q9HBJ7 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.64■□□□□ 0.41
USP29Q9HBJ7 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
USP29Q9HBJ7 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
USP29Q9HBJ7 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.64■□□□□ 0.41
USP29Q9HBJ7 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.64■□□□□ 0.41
USP29Q9HBJ7 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP29Q9HBJ7 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP29Q9HBJ7 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
USP29Q9HBJ7 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP29Q9HBJ7 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP29Q9HBJ7 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP29Q9HBJ7 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP29Q9HBJ7 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.64■□□□□ 0.41
USP29Q9HBJ7 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP29Q9HBJ7 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP29Q9HBJ7 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
USP29Q9HBJ7 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
USP29Q9HBJ7 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms