Protein–RNA interactions for Protein: Q9H3W5

LRRN3, Leucine-rich repeat neuronal protein 3, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRN3Q9H3W5 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
LRRN3Q9H3W5 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRN3Q9H3W5 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRN3Q9H3W5 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.59■□□□□ 0.25
LRRN3Q9H3W5 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRN3Q9H3W5 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRRN3Q9H3W5 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.58■□□□□ 0.25
LRRN3Q9H3W5 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.58■□□□□ 0.25
LRRN3Q9H3W5 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.58■□□□□ 0.25
LRRN3Q9H3W5 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.58■□□□□ 0.25
LRRN3Q9H3W5 AC008764.6-201ENST00000595909 2069 ntBASIC16.58■□□□□ 0.25
LRRN3Q9H3W5 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
LRRN3Q9H3W5 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
LRRN3Q9H3W5 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
LRRN3Q9H3W5 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
LRRN3Q9H3W5 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
LRRN3Q9H3W5 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LRRN3Q9H3W5 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRRN3Q9H3W5 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
LRRN3Q9H3W5 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LRRN3Q9H3W5 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.58■□□□□ 0.24
LRRN3Q9H3W5 AL645939.2-201ENST00000427340 991 ntBASIC16.58■□□□□ 0.24
LRRN3Q9H3W5 AL513480.1-201ENST00000451731 511 ntBASIC16.58■□□□□ 0.24
LRRN3Q9H3W5 RFPL4AP1-201ENST00000530883 850 ntBASIC16.58■□□□□ 0.24
LRRN3Q9H3W5 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.58■□□□□ 0.24
LRRN3Q9H3W5 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.58■□□□□ 0.24
LRRN3Q9H3W5 AC068137.2-201ENST00000605408 478 ntBASIC16.58■□□□□ 0.24
LRRN3Q9H3W5 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.58■□□□□ 0.24
LRRN3Q9H3W5 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.58■□□□□ 0.24
LRRN3Q9H3W5 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.58■□□□□ 0.24
LRRN3Q9H3W5 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
LRRN3Q9H3W5 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.58■□□□□ 0.24
LRRN3Q9H3W5 LINC01451-201ENST00000623792 534 ntBASIC16.58■□□□□ 0.24
LRRN3Q9H3W5 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.58■□□□□ 0.24
LRRN3Q9H3W5 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRRN3Q9H3W5 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LRRN3Q9H3W5 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRRN3Q9H3W5 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
LRRN3Q9H3W5 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRRN3Q9H3W5 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
LRRN3Q9H3W5 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.58■□□□□ 0.24
LRRN3Q9H3W5 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LRRN3Q9H3W5 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.24
LRRN3Q9H3W5 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
LRRN3Q9H3W5 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.58■□□□□ 0.24
LRRN3Q9H3W5 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRN3Q9H3W5 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRN3Q9H3W5 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRN3Q9H3W5 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRN3Q9H3W5 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
LRRN3Q9H3W5 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRN3Q9H3W5 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LRRN3Q9H3W5 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.57■□□□□ 0.24
LRRN3Q9H3W5 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LRRN3Q9H3W5 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRN3Q9H3W5 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
LRRN3Q9H3W5 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.57■□□□□ 0.24
LRRN3Q9H3W5 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
LRRN3Q9H3W5 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRN3Q9H3W5 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRN3Q9H3W5 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
LRRN3Q9H3W5 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
LRRN3Q9H3W5 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRN3Q9H3W5 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
LRRN3Q9H3W5 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
LRRN3Q9H3W5 PAWRP1-201ENST00000451083 565 ntBASIC16.57■□□□□ 0.24
LRRN3Q9H3W5 CYMP-203ENST00000474680 1263 ntBASIC16.57■□□□□ 0.24
LRRN3Q9H3W5 AP000344.2-201ENST00000512987 629 ntBASIC16.57■□□□□ 0.24
LRRN3Q9H3W5 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRN3Q9H3W5 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.57■□□□□ 0.24
LRRN3Q9H3W5 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRN3Q9H3W5 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRN3Q9H3W5 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.57■□□□□ 0.24
LRRN3Q9H3W5 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.57■□□□□ 0.24
LRRN3Q9H3W5 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.57■□□□□ 0.24
LRRN3Q9H3W5 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.57■□□□□ 0.24
LRRN3Q9H3W5 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRN3Q9H3W5 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
LRRN3Q9H3W5 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRN3Q9H3W5 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LRRN3Q9H3W5 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LRRN3Q9H3W5 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
LRRN3Q9H3W5 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
LRRN3Q9H3W5 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRN3Q9H3W5 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRN3Q9H3W5 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRN3Q9H3W5 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.56■□□□□ 0.24
LRRN3Q9H3W5 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRN3Q9H3W5 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRN3Q9H3W5 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRN3Q9H3W5 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.56■□□□□ 0.24
LRRN3Q9H3W5 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRN3Q9H3W5 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRRN3Q9H3W5 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.56■□□□□ 0.24
LRRN3Q9H3W5 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.56■□□□□ 0.24
LRRN3Q9H3W5 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.56■□□□□ 0.24
LRRN3Q9H3W5 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.56■□□□□ 0.24
LRRN3Q9H3W5 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRRN3Q9H3W5 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.56■□□□□ 0.24
LRRN3Q9H3W5 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms