Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.27■□□□□ 0.36
VPS11Q9H270 SPDYE13P-201ENST00000445314 798 ntBASIC17.27■□□□□ 0.36
VPS11Q9H270 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.27■□□□□ 0.36
VPS11Q9H270 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.27■□□□□ 0.36
VPS11Q9H270 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VPS11Q9H270 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.27■□□□□ 0.36
VPS11Q9H270 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VPS11Q9H270 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
VPS11Q9H270 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.27■□□□□ 0.36
VPS11Q9H270 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
VPS11Q9H270 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VPS11Q9H270 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
VPS11Q9H270 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
VPS11Q9H270 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.27■□□□□ 0.35
VPS11Q9H270 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.27■□□□□ 0.35
VPS11Q9H270 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.27■□□□□ 0.35
VPS11Q9H270 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
VPS11Q9H270 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
VPS11Q9H270 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
VPS11Q9H270 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
VPS11Q9H270 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
VPS11Q9H270 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
VPS11Q9H270 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VPS11Q9H270 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VPS11Q9H270 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VPS11Q9H270 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VPS11Q9H270 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.26■□□□□ 0.35
VPS11Q9H270 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
VPS11Q9H270 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
VPS11Q9H270 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VPS11Q9H270 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
VPS11Q9H270 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VPS11Q9H270 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VPS11Q9H270 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VPS11Q9H270 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
VPS11Q9H270 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VPS11Q9H270 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
VPS11Q9H270 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VPS11Q9H270 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VPS11Q9H270 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
VPS11Q9H270 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VPS11Q9H270 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VPS11Q9H270 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VPS11Q9H270 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
VPS11Q9H270 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.26■□□□□ 0.35
VPS11Q9H270 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.26■□□□□ 0.35
VPS11Q9H270 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.26■□□□□ 0.35
VPS11Q9H270 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.26■□□□□ 0.35
VPS11Q9H270 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.26■□□□□ 0.35
VPS11Q9H270 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.26■□□□□ 0.35
VPS11Q9H270 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
VPS11Q9H270 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.26■□□□□ 0.35
VPS11Q9H270 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.26■□□□□ 0.35
VPS11Q9H270 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.26■□□□□ 0.35
VPS11Q9H270 AC008741.2-201ENST00000612792 3115 ntBASIC17.26■□□□□ 0.35
VPS11Q9H270 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
VPS11Q9H270 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VPS11Q9H270 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VPS11Q9H270 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
VPS11Q9H270 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VPS11Q9H270 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.26■□□□□ 0.35
VPS11Q9H270 AC022188.1-201ENST00000620960 1664 ntBASIC17.26■□□□□ 0.35
VPS11Q9H270 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VPS11Q9H270 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
VPS11Q9H270 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VPS11Q9H270 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VPS11Q9H270 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VPS11Q9H270 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
VPS11Q9H270 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VPS11Q9H270 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VPS11Q9H270 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
VPS11Q9H270 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.25■□□□□ 0.35
VPS11Q9H270 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VPS11Q9H270 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.25■□□□□ 0.35
VPS11Q9H270 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.25■□□□□ 0.35
VPS11Q9H270 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
VPS11Q9H270 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
VPS11Q9H270 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VPS11Q9H270 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
VPS11Q9H270 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
VPS11Q9H270 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VPS11Q9H270 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
VPS11Q9H270 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VPS11Q9H270 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
VPS11Q9H270 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.25■□□□□ 0.35
VPS11Q9H270 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VPS11Q9H270 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VPS11Q9H270 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VPS11Q9H270 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.25■□□□□ 0.35
VPS11Q9H270 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.25■□□□□ 0.35
VPS11Q9H270 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.25■□□□□ 0.35
VPS11Q9H270 AC111152.3-201ENST00000569699 673 ntBASIC17.25■□□□□ 0.35
VPS11Q9H270 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.25■□□□□ 0.35
VPS11Q9H270 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.25■□□□□ 0.35
VPS11Q9H270 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.25■□□□□ 0.35
VPS11Q9H270 AC083849.1-201ENST00000615227 514 ntBASIC17.25■□□□□ 0.35
VPS11Q9H270 AC124864.1-201ENST00000623408 392 ntBASIC17.25■□□□□ 0.35
VPS11Q9H270 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.25■□□□□ 0.35
VPS11Q9H270 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.25■□□□□ 0.35
VPS11Q9H270 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms