Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 BICD1-207ENST00000551848 1962 ntBASIC21.32■■□□□ 1
CNTNAP4Q9C0A0 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CNTNAP4Q9C0A0 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.32■■□□□ 1
CNTNAP4Q9C0A0 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC21.32■■□□□ 1
CNTNAP4Q9C0A0 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CNTNAP4Q9C0A0 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CNTNAP4Q9C0A0 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC21.32■■□□□ 1
CNTNAP4Q9C0A0 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CNTNAP4Q9C0A0 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC21.31■■□□□ 1
CNTNAP4Q9C0A0 U91328.1-201ENST00000437528 223 ntBASIC21.31■■□□□ 1
CNTNAP4Q9C0A0 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC21.31■■□□□ 1
CNTNAP4Q9C0A0 TP53TG3HP-202ENST00000569755 579 ntBASIC21.31■■□□□ 1
CNTNAP4Q9C0A0 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC21.31■■□□□ 1
CNTNAP4Q9C0A0 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC21.31■■□□□ 1
CNTNAP4Q9C0A0 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC21.31■■□□□ 1
CNTNAP4Q9C0A0 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC21.31■■□□□ 1
CNTNAP4Q9C0A0 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CNTNAP4Q9C0A0 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC21.31■■□□□ 1
CNTNAP4Q9C0A0 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CNTNAP4Q9C0A0 AC012317.2-201ENST00000623305 2251 ntBASIC21.31■■□□□ 1
CNTNAP4Q9C0A0 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC21.31■■□□□ 1
CNTNAP4Q9C0A0 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.31■■□□□ 1
CNTNAP4Q9C0A0 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
CNTNAP4Q9C0A0 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CNTNAP4Q9C0A0 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC21.31■■□□□ 1
CNTNAP4Q9C0A0 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.31■■□□□ 1
CNTNAP4Q9C0A0 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CNTNAP4Q9C0A0 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC21.31■■□□□ 1
CNTNAP4Q9C0A0 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC21.3■■□□□ 1
CNTNAP4Q9C0A0 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC21.3■■□□□ 1
CNTNAP4Q9C0A0 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC21.3■■□□□ 1
CNTNAP4Q9C0A0 HLA-V-201ENST00000429037 534 ntBASIC21.3■■□□□ 1
CNTNAP4Q9C0A0 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC21.3■■□□□ 1
CNTNAP4Q9C0A0 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CNTNAP4Q9C0A0 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CNTNAP4Q9C0A0 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CNTNAP4Q9C0A0 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC21.3■■□□□ 1
CNTNAP4Q9C0A0 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC21.3■■□□□ 1
CNTNAP4Q9C0A0 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC21.3■■□□□ 1
CNTNAP4Q9C0A0 SSH2-210ENST00000582084 560 ntTSL 3 BASIC21.3■■□□□ 1
CNTNAP4Q9C0A0 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC21.3■■□□□ 1
CNTNAP4Q9C0A0 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CNTNAP4Q9C0A0 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC21.3■■□□□ 1
CNTNAP4Q9C0A0 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC21.3■■□□□ 1
CNTNAP4Q9C0A0 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CNTNAP4Q9C0A0 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CNTNAP4Q9C0A0 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC21.3■■□□□ 1
CNTNAP4Q9C0A0 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC21.3■■□□□ 1
CNTNAP4Q9C0A0 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC21.3■■□□□ 1
CNTNAP4Q9C0A0 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CNTNAP4Q9C0A0 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC21.3■■□□□ 1
CNTNAP4Q9C0A0 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CNTNAP4Q9C0A0 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC21.3■■□□□ 1
CNTNAP4Q9C0A0 AC087499.5-201ENST00000452760 1342 ntBASIC21.3■■□□□ 1
CNTNAP4Q9C0A0 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
CNTNAP4Q9C0A0 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC21.3■■□□□ 1
CNTNAP4Q9C0A0 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CNTNAP4Q9C0A0 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CNTNAP4Q9C0A0 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC21.29■■□□□ 1
CNTNAP4Q9C0A0 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CNTNAP4Q9C0A0 PRYP6-201ENST00000514804 343 ntBASIC21.29■■□□□ 1
CNTNAP4Q9C0A0 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC21.29■■□□□ 1
CNTNAP4Q9C0A0 CDK4-206ENST00000549606 558 ntTSL 2 BASIC21.29■■□□□ 1
CNTNAP4Q9C0A0 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC21.29■■□□□ 1
CNTNAP4Q9C0A0 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC21.29■■□□□ 1
CNTNAP4Q9C0A0 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC21.29■■□□□ 1
CNTNAP4Q9C0A0 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CNTNAP4Q9C0A0 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CNTNAP4Q9C0A0 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.29■■□□□ 1
CNTNAP4Q9C0A0 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CNTNAP4Q9C0A0 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.29■■□□□ 1
CNTNAP4Q9C0A0 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC21.29■■□□□ 1
CNTNAP4Q9C0A0 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
CNTNAP4Q9C0A0 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC21.29■■□□□ 1
CNTNAP4Q9C0A0 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CNTNAP4Q9C0A0 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CNTNAP4Q9C0A0 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CNTNAP4Q9C0A0 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
CNTNAP4Q9C0A0 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC21.29■■□□□ 1
CNTNAP4Q9C0A0 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
CNTNAP4Q9C0A0 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC21.29■■□□□ 1
CNTNAP4Q9C0A0 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
CNTNAP4Q9C0A0 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CNTNAP4Q9C0A0 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC21.29■■□□□ 1
CNTNAP4Q9C0A0 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC21.29■■□□□ 1
CNTNAP4Q9C0A0 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC21.29■■□□□ 1
CNTNAP4Q9C0A0 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC21.29■■□□□ 1
CNTNAP4Q9C0A0 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CNTNAP4Q9C0A0 FAM220BP-201ENST00000377689 816 ntBASIC21.29■■□□□ 1
CNTNAP4Q9C0A0 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
CNTNAP4Q9C0A0 ARSEP1-201ENST00000420443 635 ntBASIC21.29■■□□□ 1
CNTNAP4Q9C0A0 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC21.29■■□□□ 1
CNTNAP4Q9C0A0 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
CNTNAP4Q9C0A0 KRT17P7-201ENST00000451704 1104 ntBASIC21.29■■□□□ 1
CNTNAP4Q9C0A0 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC21.29■■□□□ 1
CNTNAP4Q9C0A0 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC21.29■■□□□ 1
CNTNAP4Q9C0A0 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC21.29■■□□□ 1
CNTNAP4Q9C0A0 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC21.29■■□□□ 1
CNTNAP4Q9C0A0 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CNTNAP4Q9C0A0 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms