Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.91□□□□□ -0.18
NKX6-2Q9C056 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.91□□□□□ -0.18
NKX6-2Q9C056 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC13.91□□□□□ -0.18
NKX6-2Q9C056 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.91□□□□□ -0.18
NKX6-2Q9C056 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NKX6-2Q9C056 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NKX6-2Q9C056 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NKX6-2Q9C056 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NKX6-2Q9C056 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
NKX6-2Q9C056 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NKX6-2Q9C056 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC13.91□□□□□ -0.18
NKX6-2Q9C056 AC004951.3-201ENST00000418645 1148 ntBASIC13.91□□□□□ -0.18
NKX6-2Q9C056 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC13.91□□□□□ -0.18
NKX6-2Q9C056 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC13.91□□□□□ -0.18
NKX6-2Q9C056 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC13.91□□□□□ -0.18
NKX6-2Q9C056 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC13.91□□□□□ -0.18
NKX6-2Q9C056 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC13.91□□□□□ -0.18
NKX6-2Q9C056 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC13.91□□□□□ -0.18
NKX6-2Q9C056 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NKX6-2Q9C056 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC13.91□□□□□ -0.18
NKX6-2Q9C056 AC009065.1-201ENST00000564055 1225 ntBASIC13.91□□□□□ -0.18
NKX6-2Q9C056 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC13.91□□□□□ -0.18
NKX6-2Q9C056 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
NKX6-2Q9C056 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC13.91□□□□□ -0.18
NKX6-2Q9C056 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NKX6-2Q9C056 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
NKX6-2Q9C056 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
NKX6-2Q9C056 SDHAP2-201ENST00000455183 2001 ntBASIC13.91□□□□□ -0.18
NKX6-2Q9C056 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
NKX6-2Q9C056 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.91□□□□□ -0.18
NKX6-2Q9C056 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC13.91□□□□□ -0.18
NKX6-2Q9C056 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC13.91□□□□□ -0.18
NKX6-2Q9C056 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NKX6-2Q9C056 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NKX6-2Q9C056 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
NKX6-2Q9C056 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NKX6-2Q9C056 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NKX6-2Q9C056 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NKX6-2Q9C056 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
NKX6-2Q9C056 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NKX6-2Q9C056 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NKX6-2Q9C056 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
NKX6-2Q9C056 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX6-2Q9C056 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX6-2Q9C056 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC13.9□□□□□ -0.18
NKX6-2Q9C056 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX6-2Q9C056 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NKX6-2Q9C056 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX6-2Q9C056 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX6-2Q9C056 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX6-2Q9C056 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
NKX6-2Q9C056 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
NKX6-2Q9C056 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX6-2Q9C056 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NKX6-2Q9C056 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NKX6-2Q9C056 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NKX6-2Q9C056 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX6-2Q9C056 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NKX6-2Q9C056 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX6-2Q9C056 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX6-2Q9C056 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC13.9□□□□□ -0.18
NKX6-2Q9C056 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC13.9□□□□□ -0.18
NKX6-2Q9C056 MCCD1P1-208ENST00000445732 328 ntBASIC13.9□□□□□ -0.18
NKX6-2Q9C056 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC13.9□□□□□ -0.18
NKX6-2Q9C056 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NKX6-2Q9C056 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC13.9□□□□□ -0.18
NKX6-2Q9C056 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC13.9□□□□□ -0.18
NKX6-2Q9C056 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC13.9□□□□□ -0.18
NKX6-2Q9C056 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC13.9□□□□□ -0.18
NKX6-2Q9C056 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
NKX6-2Q9C056 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
NKX6-2Q9C056 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX6-2Q9C056 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX6-2Q9C056 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
NKX6-2Q9C056 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
NKX6-2Q9C056 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
NKX6-2Q9C056 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX6-2Q9C056 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX6-2Q9C056 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX6-2Q9C056 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX6-2Q9C056 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX6-2Q9C056 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX6-2Q9C056 AC005089.1-201ENST00000619486 2241 ntBASIC13.9□□□□□ -0.18
NKX6-2Q9C056 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX6-2Q9C056 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX6-2Q9C056 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.9□□□□□ -0.18
NKX6-2Q9C056 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
NKX6-2Q9C056 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
NKX6-2Q9C056 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
NKX6-2Q9C056 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.19
NKX6-2Q9C056 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NKX6-2Q9C056 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
NKX6-2Q9C056 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.89□□□□□ -0.19
NKX6-2Q9C056 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NKX6-2Q9C056 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
NKX6-2Q9C056 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX6-2Q9C056 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX6-2Q9C056 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX6-2Q9C056 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC13.89□□□□□ -0.19
NKX6-2Q9C056 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms