Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSBP3Q9BWW4 MIR4751-201ENST00000578027 74 ntBASIC14.32□□□□□ -0.12
SSBP3Q9BWW4 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.32□□□□□ -0.12
SSBP3Q9BWW4 GGTLC5P-201ENST00000617623 998 ntBASIC14.32□□□□□ -0.12
SSBP3Q9BWW4 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSBP3Q9BWW4 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SSBP3Q9BWW4 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SSBP3Q9BWW4 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSBP3Q9BWW4 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSBP3Q9BWW4 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.32□□□□□ -0.12
SSBP3Q9BWW4 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC14.32□□□□□ -0.12
SSBP3Q9BWW4 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSBP3Q9BWW4 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.32□□□□□ -0.12
SSBP3Q9BWW4 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC14.32□□□□□ -0.12
SSBP3Q9BWW4 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSBP3Q9BWW4 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSBP3Q9BWW4 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSBP3Q9BWW4 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.32□□□□□ -0.12
SSBP3Q9BWW4 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
SSBP3Q9BWW4 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SSBP3Q9BWW4 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSBP3Q9BWW4 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSBP3Q9BWW4 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SSBP3Q9BWW4 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSBP3Q9BWW4 LINC00896-202ENST00000609602 2128 ntBASIC14.32□□□□□ -0.12
SSBP3Q9BWW4 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSBP3Q9BWW4 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSBP3Q9BWW4 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SSBP3Q9BWW4 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SSBP3Q9BWW4 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SSBP3Q9BWW4 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC14.31□□□□□ -0.12
SSBP3Q9BWW4 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
SSBP3Q9BWW4 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SSBP3Q9BWW4 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SSBP3Q9BWW4 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SSBP3Q9BWW4 FER1L4-210ENST00000615531 5998 ntBASIC14.31□□□□□ -0.12
SSBP3Q9BWW4 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SSBP3Q9BWW4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC14.31□□□□□ -0.12
SSBP3Q9BWW4 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SSBP3Q9BWW4 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SSBP3Q9BWW4 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.31□□□□□ -0.12
SSBP3Q9BWW4 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
SSBP3Q9BWW4 PTCHD3P3-201ENST00000403073 906 ntBASIC14.31□□□□□ -0.12
SSBP3Q9BWW4 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.31□□□□□ -0.12
SSBP3Q9BWW4 KRT18P3-201ENST00000451602 1288 ntBASIC14.31□□□□□ -0.12
SSBP3Q9BWW4 AC108073.2-201ENST00000464002 357 ntBASIC14.31□□□□□ -0.12
SSBP3Q9BWW4 IGHV3-65-201ENST00000523210 341 ntBASIC14.31□□□□□ -0.12
SSBP3Q9BWW4 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.31□□□□□ -0.12
SSBP3Q9BWW4 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.31□□□□□ -0.12
SSBP3Q9BWW4 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SSBP3Q9BWW4 PCDHA12-202ENST00000613593 2588 ntBASIC14.31□□□□□ -0.12
SSBP3Q9BWW4 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SSBP3Q9BWW4 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SSBP3Q9BWW4 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SSBP3Q9BWW4 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SSBP3Q9BWW4 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SSBP3Q9BWW4 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SSBP3Q9BWW4 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SSBP3Q9BWW4 AC134043.2-201ENST00000624206 2238 ntBASIC14.31□□□□□ -0.12
SSBP3Q9BWW4 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
SSBP3Q9BWW4 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SSBP3Q9BWW4 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SSBP3Q9BWW4 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SSBP3Q9BWW4 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SSBP3Q9BWW4 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SSBP3Q9BWW4 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SSBP3Q9BWW4 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
SSBP3Q9BWW4 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SSBP3Q9BWW4 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SSBP3Q9BWW4 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.31□□□□□ -0.12
SSBP3Q9BWW4 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SSBP3Q9BWW4 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SSBP3Q9BWW4 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SSBP3Q9BWW4 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SSBP3Q9BWW4 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SSBP3Q9BWW4 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SSBP3Q9BWW4 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SSBP3Q9BWW4 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SSBP3Q9BWW4 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
SSBP3Q9BWW4 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.3□□□□□ -0.12
SSBP3Q9BWW4 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SSBP3Q9BWW4 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SSBP3Q9BWW4 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SSBP3Q9BWW4 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SSBP3Q9BWW4 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SSBP3Q9BWW4 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SSBP3Q9BWW4 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SSBP3Q9BWW4 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SSBP3Q9BWW4 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SSBP3Q9BWW4 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SSBP3Q9BWW4 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SSBP3Q9BWW4 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
SSBP3Q9BWW4 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SSBP3Q9BWW4 CRYGEP-201ENST00000412192 528 ntBASIC14.3□□□□□ -0.12
SSBP3Q9BWW4 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.3□□□□□ -0.12
SSBP3Q9BWW4 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.3□□□□□ -0.12
SSBP3Q9BWW4 AC007967.2-201ENST00000432613 625 ntBASIC14.3□□□□□ -0.12
SSBP3Q9BWW4 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.3□□□□□ -0.12
SSBP3Q9BWW4 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.3□□□□□ -0.12
SSBP3Q9BWW4 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms