Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.73■□□□□ 0.43
CDK5RAP1Q96SZ6 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.73■□□□□ 0.43
CDK5RAP1Q96SZ6 AC107918.2-201ENST00000530817 355 ntBASIC17.73■□□□□ 0.43
CDK5RAP1Q96SZ6 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CDK5RAP1Q96SZ6 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.73■□□□□ 0.43
CDK5RAP1Q96SZ6 KRT19P2-202ENST00000557173 1012 ntBASIC17.73■□□□□ 0.43
CDK5RAP1Q96SZ6 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.73■□□□□ 0.43
CDK5RAP1Q96SZ6 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDK5RAP1Q96SZ6 ACTL9-202ENST00000612068 1252 ntBASIC17.73■□□□□ 0.43
CDK5RAP1Q96SZ6 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.73■□□□□ 0.43
CDK5RAP1Q96SZ6 REXO1L3P-201ENST00000622202 1288 ntBASIC17.73■□□□□ 0.43
CDK5RAP1Q96SZ6 AL645728.2-201ENST00000641974 660 ntBASIC17.73■□□□□ 0.43
CDK5RAP1Q96SZ6 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDK5RAP1Q96SZ6 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDK5RAP1Q96SZ6 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.73■□□□□ 0.43
CDK5RAP1Q96SZ6 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CDK5RAP1Q96SZ6 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.73■□□□□ 0.43
CDK5RAP1Q96SZ6 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDK5RAP1Q96SZ6 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDK5RAP1Q96SZ6 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CDK5RAP1Q96SZ6 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.73■□□□□ 0.43
CDK5RAP1Q96SZ6 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CDK5RAP1Q96SZ6 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
CDK5RAP1Q96SZ6 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CDK5RAP1Q96SZ6 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDK5RAP1Q96SZ6 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CDK5RAP1Q96SZ6 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.72■□□□□ 0.43
CDK5RAP1Q96SZ6 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.72■□□□□ 0.43
CDK5RAP1Q96SZ6 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDK5RAP1Q96SZ6 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDK5RAP1Q96SZ6 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.72■□□□□ 0.43
CDK5RAP1Q96SZ6 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDK5RAP1Q96SZ6 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDK5RAP1Q96SZ6 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDK5RAP1Q96SZ6 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDK5RAP1Q96SZ6 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDK5RAP1Q96SZ6 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDK5RAP1Q96SZ6 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDK5RAP1Q96SZ6 MIR1233-2-201ENST00000408138 82 ntBASIC17.72■□□□□ 0.43
CDK5RAP1Q96SZ6 MIR1233-1-201ENST00000408722 82 ntBASIC17.72■□□□□ 0.43
CDK5RAP1Q96SZ6 UPF3AP3-201ENST00000420996 769 ntBASIC17.72■□□□□ 0.43
CDK5RAP1Q96SZ6 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.72■□□□□ 0.43
CDK5RAP1Q96SZ6 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDK5RAP1Q96SZ6 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDK5RAP1Q96SZ6 GPALPP1-207ENST00000611650 899 ntBASIC17.72■□□□□ 0.43
CDK5RAP1Q96SZ6 AC006538.3-201ENST00000612495 578 ntBASIC17.72■□□□□ 0.43
CDK5RAP1Q96SZ6 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.72■□□□□ 0.43
CDK5RAP1Q96SZ6 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDK5RAP1Q96SZ6 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.72■□□□□ 0.43
CDK5RAP1Q96SZ6 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CDK5RAP1Q96SZ6 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
CDK5RAP1Q96SZ6 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDK5RAP1Q96SZ6 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDK5RAP1Q96SZ6 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.72■□□□□ 0.43
CDK5RAP1Q96SZ6 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.72■□□□□ 0.43
CDK5RAP1Q96SZ6 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CDK5RAP1Q96SZ6 AL133373.2-201ENST00000623187 2828 ntBASIC17.71■□□□□ 0.43
CDK5RAP1Q96SZ6 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.71■□□□□ 0.43
CDK5RAP1Q96SZ6 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDK5RAP1Q96SZ6 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDK5RAP1Q96SZ6 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CDK5RAP1Q96SZ6 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDK5RAP1Q96SZ6 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.71■□□□□ 0.43
CDK5RAP1Q96SZ6 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDK5RAP1Q96SZ6 TOP3BP1-201ENST00000420768 1380 ntBASIC17.71■□□□□ 0.43
CDK5RAP1Q96SZ6 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.71■□□□□ 0.43
CDK5RAP1Q96SZ6 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CDK5RAP1Q96SZ6 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDK5RAP1Q96SZ6 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDK5RAP1Q96SZ6 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDK5RAP1Q96SZ6 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDK5RAP1Q96SZ6 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.71■□□□□ 0.43
CDK5RAP1Q96SZ6 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDK5RAP1Q96SZ6 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.71■□□□□ 0.43
CDK5RAP1Q96SZ6 GPX1P2-201ENST00000429271 606 ntBASIC17.71■□□□□ 0.43
CDK5RAP1Q96SZ6 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CDK5RAP1Q96SZ6 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.71■□□□□ 0.43
CDK5RAP1Q96SZ6 AC074386.1-202ENST00000463561 864 ntBASIC17.71■□□□□ 0.43
CDK5RAP1Q96SZ6 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.71■□□□□ 0.43
CDK5RAP1Q96SZ6 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.71■□□□□ 0.43
CDK5RAP1Q96SZ6 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.71■□□□□ 0.43
CDK5RAP1Q96SZ6 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CDK5RAP1Q96SZ6 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.71■□□□□ 0.43
CDK5RAP1Q96SZ6 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.71■□□□□ 0.43
CDK5RAP1Q96SZ6 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.71■□□□□ 0.43
CDK5RAP1Q96SZ6 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CDK5RAP1Q96SZ6 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDK5RAP1Q96SZ6 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CDK5RAP1Q96SZ6 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDK5RAP1Q96SZ6 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDK5RAP1Q96SZ6 AC025580.3-201ENST00000617932 1424 ntBASIC17.71■□□□□ 0.43
CDK5RAP1Q96SZ6 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CDK5RAP1Q96SZ6 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CDK5RAP1Q96SZ6 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.71■□□□□ 0.42
CDK5RAP1Q96SZ6 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
CDK5RAP1Q96SZ6 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
CDK5RAP1Q96SZ6 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CDK5RAP1Q96SZ6 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDK5RAP1Q96SZ6 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.7■□□□□ 0.42
CDK5RAP1Q96SZ6 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms