Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.67■□□□□ 0.1
SNX18Q96RF0 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.67■□□□□ 0.1
SNX18Q96RF0 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SNX18Q96RF0 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNX18Q96RF0 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNX18Q96RF0 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNX18Q96RF0 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNX18Q96RF0 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.67■□□□□ 0.1
SNX18Q96RF0 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNX18Q96RF0 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SNX18Q96RF0 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SNX18Q96RF0 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNX18Q96RF0 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNX18Q96RF0 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
SNX18Q96RF0 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNX18Q96RF0 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SNX18Q96RF0 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNX18Q96RF0 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SNX18Q96RF0 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNX18Q96RF0 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNX18Q96RF0 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SNX18Q96RF0 AC010460.3-201ENST00000511359 1579 ntBASIC15.66■□□□□ 0.1
SNX18Q96RF0 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SNX18Q96RF0 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNX18Q96RF0 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNX18Q96RF0 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNX18Q96RF0 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.66■□□□□ 0.1
SNX18Q96RF0 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNX18Q96RF0 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SNX18Q96RF0 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.66■□□□□ 0.1
SNX18Q96RF0 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNX18Q96RF0 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.66■□□□□ 0.1
SNX18Q96RF0 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.66■□□□□ 0.1
SNX18Q96RF0 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.66■□□□□ 0.1
SNX18Q96RF0 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNX18Q96RF0 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SNX18Q96RF0 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SNX18Q96RF0 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.66■□□□□ 0.1
SNX18Q96RF0 AC099063.4-201ENST00000641099 1602 ntBASIC15.66■□□□□ 0.1
SNX18Q96RF0 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNX18Q96RF0 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNX18Q96RF0 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.66■□□□□ 0.1
SNX18Q96RF0 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNX18Q96RF0 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.66■□□□□ 0.1
SNX18Q96RF0 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SNX18Q96RF0 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SNX18Q96RF0 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC15.66■□□□□ 0.1
SNX18Q96RF0 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
SNX18Q96RF0 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SNX18Q96RF0 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.66■□□□□ 0.1
SNX18Q96RF0 RN7SL606P-201ENST00000472779 293 ntBASIC15.66■□□□□ 0.1
SNX18Q96RF0 AC122714.2-201ENST00000502787 707 ntBASIC15.66■□□□□ 0.1
SNX18Q96RF0 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
SNX18Q96RF0 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNX18Q96RF0 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
SNX18Q96RF0 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
SNX18Q96RF0 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SNX18Q96RF0 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNX18Q96RF0 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SNX18Q96RF0 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SNX18Q96RF0 AL603756.1-201ENST00000606511 2163 ntBASIC15.66■□□□□ 0.1
SNX18Q96RF0 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNX18Q96RF0 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.66■□□□□ 0.1
SNX18Q96RF0 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SNX18Q96RF0 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNX18Q96RF0 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNX18Q96RF0 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNX18Q96RF0 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNX18Q96RF0 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.65■□□□□ 0.1
SNX18Q96RF0 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNX18Q96RF0 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.65■□□□□ 0.1
SNX18Q96RF0 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SNX18Q96RF0 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SNX18Q96RF0 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SNX18Q96RF0 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SNX18Q96RF0 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNX18Q96RF0 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNX18Q96RF0 AL645929.1-201ENST00000420084 975 ntBASIC15.65■□□□□ 0.1
SNX18Q96RF0 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.65■□□□□ 0.1
SNX18Q96RF0 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.65■□□□□ 0.1
SNX18Q96RF0 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.65■□□□□ 0.1
SNX18Q96RF0 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.65■□□□□ 0.1
SNX18Q96RF0 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.65■□□□□ 0.1
SNX18Q96RF0 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.65■□□□□ 0.1
SNX18Q96RF0 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNX18Q96RF0 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SNX18Q96RF0 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SNX18Q96RF0 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNX18Q96RF0 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNX18Q96RF0 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.65■□□□□ 0.1
SNX18Q96RF0 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.65■□□□□ 0.1
SNX18Q96RF0 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.65■□□□□ 0.1
SNX18Q96RF0 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SNX18Q96RF0 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SNX18Q96RF0 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.65■□□□□ 0.1
SNX18Q96RF0 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNX18Q96RF0 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNX18Q96RF0 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SNX18Q96RF0 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNX18Q96RF0 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms