Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTCD2Q8WV60 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.39■□□□□ 0.37
PTCD2Q8WV60 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.39■□□□□ 0.37
PTCD2Q8WV60 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.39■□□□□ 0.37
PTCD2Q8WV60 SIGLEC30P-201ENST00000455569 941 ntBASIC17.39■□□□□ 0.37
PTCD2Q8WV60 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.39■□□□□ 0.37
PTCD2Q8WV60 BX005266.1-201ENST00000473402 457 ntBASIC17.39■□□□□ 0.37
PTCD2Q8WV60 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.39■□□□□ 0.37
PTCD2Q8WV60 AL662844.1-201ENST00000546340 181 ntBASIC17.39■□□□□ 0.37
PTCD2Q8WV60 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.39■□□□□ 0.37
PTCD2Q8WV60 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.39■□□□□ 0.37
PTCD2Q8WV60 MIR7706-201ENST00000613747 67 ntBASIC17.39■□□□□ 0.37
PTCD2Q8WV60 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.39■□□□□ 0.37
PTCD2Q8WV60 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTCD2Q8WV60 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTCD2Q8WV60 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTCD2Q8WV60 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTCD2Q8WV60 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTCD2Q8WV60 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
PTCD2Q8WV60 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PTCD2Q8WV60 SIGLEC16-201ENST00000599858 1437 ntBASIC17.38■□□□□ 0.37
PTCD2Q8WV60 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PTCD2Q8WV60 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTCD2Q8WV60 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTCD2Q8WV60 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.38■□□□□ 0.37
PTCD2Q8WV60 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
PTCD2Q8WV60 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PTCD2Q8WV60 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTCD2Q8WV60 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTCD2Q8WV60 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTCD2Q8WV60 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTCD2Q8WV60 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PTCD2Q8WV60 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
PTCD2Q8WV60 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTCD2Q8WV60 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTCD2Q8WV60 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PTCD2Q8WV60 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PTCD2Q8WV60 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
PTCD2Q8WV60 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
PTCD2Q8WV60 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.38■□□□□ 0.37
PTCD2Q8WV60 AL031284.1-201ENST00000419297 478 ntBASIC17.38■□□□□ 0.37
PTCD2Q8WV60 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC17.38■□□□□ 0.37
PTCD2Q8WV60 AL020989.1-201ENST00000422979 469 ntBASIC17.38■□□□□ 0.37
PTCD2Q8WV60 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PTCD2Q8WV60 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PTCD2Q8WV60 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
PTCD2Q8WV60 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.38■□□□□ 0.37
PTCD2Q8WV60 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.38■□□□□ 0.37
PTCD2Q8WV60 AC025062.2-201ENST00000605477 670 ntBASIC17.38■□□□□ 0.37
PTCD2Q8WV60 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.38■□□□□ 0.37
PTCD2Q8WV60 AL773604.1-201ENST00000617417 272 ntBASIC17.38■□□□□ 0.37
PTCD2Q8WV60 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTCD2Q8WV60 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTCD2Q8WV60 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.38■□□□□ 0.37
PTCD2Q8WV60 AC243591.1-201ENST00000452967 1364 ntBASIC17.38■□□□□ 0.37
PTCD2Q8WV60 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.38■□□□□ 0.37
PTCD2Q8WV60 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTCD2Q8WV60 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
PTCD2Q8WV60 GPR89P-201ENST00000407924 1495 ntBASIC17.37■□□□□ 0.37
PTCD2Q8WV60 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
PTCD2Q8WV60 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTCD2Q8WV60 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.37■□□□□ 0.37
PTCD2Q8WV60 AL356309.3-201ENST00000624132 1934 ntBASIC17.37■□□□□ 0.37
PTCD2Q8WV60 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.37■□□□□ 0.37
PTCD2Q8WV60 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
PTCD2Q8WV60 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.37■□□□□ 0.37
PTCD2Q8WV60 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PTCD2Q8WV60 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTCD2Q8WV60 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.37■□□□□ 0.37
PTCD2Q8WV60 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.37■□□□□ 0.37
PTCD2Q8WV60 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.37■□□□□ 0.37
PTCD2Q8WV60 SPDYE21P-201ENST00000413323 827 ntBASIC17.37■□□□□ 0.37
PTCD2Q8WV60 ACTG1P4-201ENST00000425123 1122 ntBASIC17.37■□□□□ 0.37
PTCD2Q8WV60 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PTCD2Q8WV60 RPS2P1-201ENST00000434010 821 ntBASIC17.37■□□□□ 0.37
PTCD2Q8WV60 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.37■□□□□ 0.37
PTCD2Q8WV60 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.37■□□□□ 0.37
PTCD2Q8WV60 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.37■□□□□ 0.37
PTCD2Q8WV60 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PTCD2Q8WV60 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.37■□□□□ 0.37
PTCD2Q8WV60 AC073592.4-201ENST00000623827 446 ntBASIC17.37■□□□□ 0.37
PTCD2Q8WV60 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PTCD2Q8WV60 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTCD2Q8WV60 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTCD2Q8WV60 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.37■□□□□ 0.37
PTCD2Q8WV60 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PTCD2Q8WV60 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTCD2Q8WV60 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.37■□□□□ 0.37
PTCD2Q8WV60 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.37■□□□□ 0.37
PTCD2Q8WV60 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTCD2Q8WV60 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.37■□□□□ 0.37
PTCD2Q8WV60 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PTCD2Q8WV60 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTCD2Q8WV60 NKILA-202ENST00000614771 2598 ntBASIC17.36■□□□□ 0.37
PTCD2Q8WV60 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTCD2Q8WV60 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PTCD2Q8WV60 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTCD2Q8WV60 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTCD2Q8WV60 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.36■□□□□ 0.37
PTCD2Q8WV60 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms