Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
SNED1Q8TER0 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SNED1Q8TER0 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC20.62■□□□□ 0.89
SNED1Q8TER0 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SNED1Q8TER0 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SNED1Q8TER0 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SNED1Q8TER0 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SNED1Q8TER0 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.62■□□□□ 0.89
SNED1Q8TER0 TOP3BP1-201ENST00000420768 1380 ntBASIC20.62■□□□□ 0.89
SNED1Q8TER0 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SNED1Q8TER0 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC20.62■□□□□ 0.89
SNED1Q8TER0 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.62■□□□□ 0.89
SNED1Q8TER0 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SNED1Q8TER0 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
SNED1Q8TER0 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SNED1Q8TER0 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC20.61■□□□□ 0.89
SNED1Q8TER0 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC20.61■□□□□ 0.89
SNED1Q8TER0 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC20.61■□□□□ 0.89
SNED1Q8TER0 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SNED1Q8TER0 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNED1Q8TER0 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC20.61■□□□□ 0.89
SNED1Q8TER0 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
SNED1Q8TER0 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.61■□□□□ 0.89
SNED1Q8TER0 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SNED1Q8TER0 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SNED1Q8TER0 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SNED1Q8TER0 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
SNED1Q8TER0 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
SNED1Q8TER0 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNED1Q8TER0 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SNED1Q8TER0 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNED1Q8TER0 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SNED1Q8TER0 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SNED1Q8TER0 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC20.61■□□□□ 0.89
SNED1Q8TER0 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC20.61■□□□□ 0.89
SNED1Q8TER0 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC20.61■□□□□ 0.89
SNED1Q8TER0 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.61■□□□□ 0.89
SNED1Q8TER0 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.6■□□□□ 0.89
SNED1Q8TER0 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.6■□□□□ 0.89
SNED1Q8TER0 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC20.6■□□□□ 0.89
SNED1Q8TER0 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
SNED1Q8TER0 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SNED1Q8TER0 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.6■□□□□ 0.89
SNED1Q8TER0 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNED1Q8TER0 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SNED1Q8TER0 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SNED1Q8TER0 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC20.6■□□□□ 0.89
SNED1Q8TER0 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SNED1Q8TER0 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SNED1Q8TER0 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
SNED1Q8TER0 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNED1Q8TER0 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.6■□□□□ 0.89
SNED1Q8TER0 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SNED1Q8TER0 ARSEP1-201ENST00000420443 635 ntBASIC20.6■□□□□ 0.89
SNED1Q8TER0 HLA-V-204ENST00000476601 1289 ntBASIC20.6■□□□□ 0.89
SNED1Q8TER0 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC20.6■□□□□ 0.89
SNED1Q8TER0 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC20.6■□□□□ 0.89
SNED1Q8TER0 AC027369.6-201ENST00000525520 931 ntBASIC20.6■□□□□ 0.89
SNED1Q8TER0 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC20.6■□□□□ 0.89
SNED1Q8TER0 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNED1Q8TER0 BANF1P1-201ENST00000553684 263 ntBASIC20.6■□□□□ 0.89
SNED1Q8TER0 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC20.6■□□□□ 0.89
SNED1Q8TER0 AC008738.7-201ENST00000609744 511 ntBASIC20.6■□□□□ 0.89
SNED1Q8TER0 GPER1-207ENST00000619052 571 ntTSL 2 BASIC20.6■□□□□ 0.89
SNED1Q8TER0 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.6■□□□□ 0.89
SNED1Q8TER0 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNED1Q8TER0 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SNED1Q8TER0 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC20.59■□□□□ 0.89
SNED1Q8TER0 AL390961.4-201ENST00000623958 2535 ntBASIC20.59■□□□□ 0.89
SNED1Q8TER0 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNED1Q8TER0 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SNED1Q8TER0 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC20.59■□□□□ 0.89
SNED1Q8TER0 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SNED1Q8TER0 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNED1Q8TER0 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SNED1Q8TER0 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC20.59■□□□□ 0.89
SNED1Q8TER0 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
SNED1Q8TER0 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC20.59■□□□□ 0.89
SNED1Q8TER0 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC20.59■□□□□ 0.89
SNED1Q8TER0 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNED1Q8TER0 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SNED1Q8TER0 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SNED1Q8TER0 AC105233.2-201ENST00000523697 349 ntBASIC20.59■□□□□ 0.89
SNED1Q8TER0 AF228730.5-201ENST00000530288 346 ntBASIC20.59■□□□□ 0.89
SNED1Q8TER0 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC20.59■□□□□ 0.89
SNED1Q8TER0 AC009407.1-201ENST00000568958 598 ntBASIC20.59■□□□□ 0.89
SNED1Q8TER0 AC027307.3-201ENST00000594262 1100 ntBASIC20.59■□□□□ 0.89
SNED1Q8TER0 AC004790.1-201ENST00000612686 536 ntBASIC20.59■□□□□ 0.89
SNED1Q8TER0 AC018529.1-201ENST00000613063 361 ntBASIC20.59■□□□□ 0.89
SNED1Q8TER0 WT1-AS_2.1-201ENST00000613208 137 ntBASIC20.59■□□□□ 0.89
SNED1Q8TER0 MIR6752-201ENST00000618442 71 ntBASIC20.59■□□□□ 0.89
SNED1Q8TER0 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC20.59■□□□□ 0.89
SNED1Q8TER0 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNED1Q8TER0 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNED1Q8TER0 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNED1Q8TER0 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNED1Q8TER0 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SNED1Q8TER0 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.59■□□□□ 0.89
SNED1Q8TER0 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNED1Q8TER0 HARS-204ENST00000438307 1789 ntTSL 2 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms