Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CNIH3Q8TBE1 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CNIH3Q8TBE1 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CNIH3Q8TBE1 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.69■□□□□ 0.1
CNIH3Q8TBE1 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CNIH3Q8TBE1 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CNIH3Q8TBE1 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CNIH3Q8TBE1 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
CNIH3Q8TBE1 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.69■□□□□ 0.1
CNIH3Q8TBE1 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CNIH3Q8TBE1 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CNIH3Q8TBE1 RPS2P55-201ENST00000397318 883 ntBASIC15.69■□□□□ 0.1
CNIH3Q8TBE1 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
CNIH3Q8TBE1 AL158047.1-201ENST00000445918 881 ntBASIC15.69■□□□□ 0.1
CNIH3Q8TBE1 AC098590.1-201ENST00000468126 897 ntBASIC15.69■□□□□ 0.1
CNIH3Q8TBE1 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CNIH3Q8TBE1 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.69■□□□□ 0.1
CNIH3Q8TBE1 AC107956.1-201ENST00000494359 873 ntBASIC15.69■□□□□ 0.1
CNIH3Q8TBE1 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC15.69■□□□□ 0.1
CNIH3Q8TBE1 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CNIH3Q8TBE1 AC104640.1-201ENST00000562617 2109 ntBASIC15.69■□□□□ 0.1
CNIH3Q8TBE1 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC15.69■□□□□ 0.1
CNIH3Q8TBE1 AC004263.2-201ENST00000617183 678 ntBASIC15.69■□□□□ 0.1
CNIH3Q8TBE1 AC010653.2-201ENST00000623505 997 ntBASIC15.69■□□□□ 0.1
CNIH3Q8TBE1 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CNIH3Q8TBE1 KRT89P-201ENST00000620027 1478 ntBASIC15.69■□□□□ 0.1
CNIH3Q8TBE1 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.69■□□□□ 0.1
CNIH3Q8TBE1 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CNIH3Q8TBE1 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.69■□□□□ 0.1
CNIH3Q8TBE1 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.69■□□□□ 0.1
CNIH3Q8TBE1 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CNIH3Q8TBE1 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.69■□□□□ 0.1
CNIH3Q8TBE1 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CNIH3Q8TBE1 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.69■□□□□ 0.1
CNIH3Q8TBE1 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CNIH3Q8TBE1 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CNIH3Q8TBE1 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CNIH3Q8TBE1 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNIH3Q8TBE1 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNIH3Q8TBE1 AL645728.1-201ENST00000366221 2101 ntBASIC15.68■□□□□ 0.1
CNIH3Q8TBE1 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CNIH3Q8TBE1 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNIH3Q8TBE1 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.68■□□□□ 0.1
CNIH3Q8TBE1 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
CNIH3Q8TBE1 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNIH3Q8TBE1 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CNIH3Q8TBE1 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNIH3Q8TBE1 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNIH3Q8TBE1 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNIH3Q8TBE1 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNIH3Q8TBE1 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNIH3Q8TBE1 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CNIH3Q8TBE1 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CNIH3Q8TBE1 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNIH3Q8TBE1 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.68■□□□□ 0.1
CNIH3Q8TBE1 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CNIH3Q8TBE1 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CNIH3Q8TBE1 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNIH3Q8TBE1 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNIH3Q8TBE1 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CNIH3Q8TBE1 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CNIH3Q8TBE1 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNIH3Q8TBE1 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CNIH3Q8TBE1 TSPY12P-201ENST00000421279 868 ntBASIC15.68■□□□□ 0.1
CNIH3Q8TBE1 GCSHP5-201ENST00000443090 522 ntBASIC15.68■□□□□ 0.1
CNIH3Q8TBE1 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNIH3Q8TBE1 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC15.68■□□□□ 0.1
CNIH3Q8TBE1 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CNIH3Q8TBE1 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CNIH3Q8TBE1 AC026471.5-201ENST00000615068 467 ntBASIC15.68■□□□□ 0.1
CNIH3Q8TBE1 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNIH3Q8TBE1 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNIH3Q8TBE1 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CNIH3Q8TBE1 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.68■□□□□ 0.1
CNIH3Q8TBE1 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CNIH3Q8TBE1 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CNIH3Q8TBE1 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.68■□□□□ 0.1
CNIH3Q8TBE1 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.68■□□□□ 0.1
CNIH3Q8TBE1 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CNIH3Q8TBE1 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNIH3Q8TBE1 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNIH3Q8TBE1 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNIH3Q8TBE1 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNIH3Q8TBE1 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNIH3Q8TBE1 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.68■□□□□ 0.1
CNIH3Q8TBE1 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNIH3Q8TBE1 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.67■□□□□ 0.1
CNIH3Q8TBE1 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNIH3Q8TBE1 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.67■□□□□ 0.1
CNIH3Q8TBE1 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNIH3Q8TBE1 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.67■□□□□ 0.1
CNIH3Q8TBE1 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNIH3Q8TBE1 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CNIH3Q8TBE1 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNIH3Q8TBE1 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.67■□□□□ 0.1
CNIH3Q8TBE1 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
CNIH3Q8TBE1 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC15.67■□□□□ 0.1
CNIH3Q8TBE1 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNIH3Q8TBE1 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNIH3Q8TBE1 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms