Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.2■□□□□ 0.18
SIMC1Q8NDZ2 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SIMC1Q8NDZ2 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SIMC1Q8NDZ2 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SIMC1Q8NDZ2 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SIMC1Q8NDZ2 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SIMC1Q8NDZ2 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.2■□□□□ 0.18
SIMC1Q8NDZ2 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SIMC1Q8NDZ2 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
SIMC1Q8NDZ2 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SIMC1Q8NDZ2 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
SIMC1Q8NDZ2 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SIMC1Q8NDZ2 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SIMC1Q8NDZ2 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SIMC1Q8NDZ2 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.19■□□□□ 0.18
SIMC1Q8NDZ2 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SIMC1Q8NDZ2 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.19■□□□□ 0.18
SIMC1Q8NDZ2 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SIMC1Q8NDZ2 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SIMC1Q8NDZ2 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SIMC1Q8NDZ2 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SIMC1Q8NDZ2 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SIMC1Q8NDZ2 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SIMC1Q8NDZ2 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.19■□□□□ 0.18
SIMC1Q8NDZ2 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.19■□□□□ 0.18
SIMC1Q8NDZ2 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SIMC1Q8NDZ2 AL020989.1-201ENST00000422979 469 ntBASIC16.19■□□□□ 0.18
SIMC1Q8NDZ2 FGFR3P6-201ENST00000457012 610 ntBASIC16.19■□□□□ 0.18
SIMC1Q8NDZ2 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.19■□□□□ 0.18
SIMC1Q8NDZ2 SART3-203ENST00000546611 1184 ntBASIC16.19■□□□□ 0.18
SIMC1Q8NDZ2 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.19■□□□□ 0.18
SIMC1Q8NDZ2 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.19■□□□□ 0.18
SIMC1Q8NDZ2 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SIMC1Q8NDZ2 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.19■□□□□ 0.18
SIMC1Q8NDZ2 AC073592.4-201ENST00000623827 446 ntBASIC16.19■□□□□ 0.18
SIMC1Q8NDZ2 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
SIMC1Q8NDZ2 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SIMC1Q8NDZ2 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SIMC1Q8NDZ2 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
SIMC1Q8NDZ2 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SIMC1Q8NDZ2 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SIMC1Q8NDZ2 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SIMC1Q8NDZ2 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.19■□□□□ 0.18
SIMC1Q8NDZ2 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SIMC1Q8NDZ2 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SIMC1Q8NDZ2 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SIMC1Q8NDZ2 AC093525.9-201ENST00000624961 1746 ntBASIC16.19■□□□□ 0.18
SIMC1Q8NDZ2 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.19■□□□□ 0.18
SIMC1Q8NDZ2 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.19■□□□□ 0.18
SIMC1Q8NDZ2 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SIMC1Q8NDZ2 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SIMC1Q8NDZ2 AC016396.2-201ENST00000562575 1417 ntBASIC16.19■□□□□ 0.18
SIMC1Q8NDZ2 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
SIMC1Q8NDZ2 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SIMC1Q8NDZ2 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SIMC1Q8NDZ2 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
SIMC1Q8NDZ2 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SIMC1Q8NDZ2 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SIMC1Q8NDZ2 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SIMC1Q8NDZ2 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.18■□□□□ 0.18
SIMC1Q8NDZ2 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SIMC1Q8NDZ2 AC060834.1-201ENST00000443027 2032 ntBASIC16.18■□□□□ 0.18
SIMC1Q8NDZ2 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SIMC1Q8NDZ2 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.18■□□□□ 0.18
SIMC1Q8NDZ2 FLJ38576-201ENST00000623820 2459 ntBASIC16.18■□□□□ 0.18
SIMC1Q8NDZ2 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SIMC1Q8NDZ2 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SIMC1Q8NDZ2 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SIMC1Q8NDZ2 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SIMC1Q8NDZ2 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SIMC1Q8NDZ2 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
SIMC1Q8NDZ2 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.18■□□□□ 0.18
SIMC1Q8NDZ2 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SIMC1Q8NDZ2 AC008608.2-201ENST00000606089 416 ntBASIC16.18■□□□□ 0.18
SIMC1Q8NDZ2 AL355877.3-201ENST00000622820 899 ntBASIC16.18■□□□□ 0.18
SIMC1Q8NDZ2 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SIMC1Q8NDZ2 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SIMC1Q8NDZ2 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SIMC1Q8NDZ2 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.18■□□□□ 0.18
SIMC1Q8NDZ2 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
SIMC1Q8NDZ2 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
SIMC1Q8NDZ2 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SIMC1Q8NDZ2 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SIMC1Q8NDZ2 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.18■□□□□ 0.18
SIMC1Q8NDZ2 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SIMC1Q8NDZ2 SIGLEC16-201ENST00000599858 1437 ntBASIC16.18■□□□□ 0.18
SIMC1Q8NDZ2 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.18■□□□□ 0.18
SIMC1Q8NDZ2 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SIMC1Q8NDZ2 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SIMC1Q8NDZ2 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SIMC1Q8NDZ2 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SIMC1Q8NDZ2 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SIMC1Q8NDZ2 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SIMC1Q8NDZ2 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SIMC1Q8NDZ2 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.17■□□□□ 0.18
SIMC1Q8NDZ2 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SIMC1Q8NDZ2 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.17■□□□□ 0.18
SIMC1Q8NDZ2 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.17■□□□□ 0.18
SIMC1Q8NDZ2 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SIMC1Q8NDZ2 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms