Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIX5Q8N196 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIX5Q8N196 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIX5Q8N196 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIX5Q8N196 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
SIX5Q8N196 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SIX5Q8N196 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SIX5Q8N196 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.51■□□□□ 0.39
SIX5Q8N196 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.51■□□□□ 0.39
SIX5Q8N196 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIX5Q8N196 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SIX5Q8N196 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.51■□□□□ 0.39
SIX5Q8N196 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SIX5Q8N196 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIX5Q8N196 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SIX5Q8N196 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIX5Q8N196 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIX5Q8N196 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIX5Q8N196 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.5■□□□□ 0.39
SIX5Q8N196 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SIX5Q8N196 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.5■□□□□ 0.39
SIX5Q8N196 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SIX5Q8N196 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SIX5Q8N196 AC069120.2-201ENST00000524091 540 ntBASIC17.5■□□□□ 0.39
SIX5Q8N196 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.5■□□□□ 0.39
SIX5Q8N196 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.5■□□□□ 0.39
SIX5Q8N196 CR383656.12-201ENST00000549567 513 ntBASIC17.5■□□□□ 0.39
SIX5Q8N196 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
SIX5Q8N196 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.5■□□□□ 0.39
SIX5Q8N196 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SIX5Q8N196 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
SIX5Q8N196 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIX5Q8N196 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SIX5Q8N196 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
SIX5Q8N196 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIX5Q8N196 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIX5Q8N196 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
SIX5Q8N196 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIX5Q8N196 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.5■□□□□ 0.39
SIX5Q8N196 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SIX5Q8N196 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SIX5Q8N196 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
SIX5Q8N196 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SIX5Q8N196 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIX5Q8N196 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIX5Q8N196 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
SIX5Q8N196 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SIX5Q8N196 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.49■□□□□ 0.39
SIX5Q8N196 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIX5Q8N196 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SIX5Q8N196 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIX5Q8N196 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SIX5Q8N196 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIX5Q8N196 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIX5Q8N196 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
SIX5Q8N196 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.49■□□□□ 0.39
SIX5Q8N196 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SIX5Q8N196 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.49■□□□□ 0.39
SIX5Q8N196 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIX5Q8N196 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.49■□□□□ 0.39
SIX5Q8N196 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.49■□□□□ 0.39
SIX5Q8N196 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.49■□□□□ 0.39
SIX5Q8N196 SPDYE14P-201ENST00000442619 822 ntBASIC17.49■□□□□ 0.39
SIX5Q8N196 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIX5Q8N196 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.49■□□□□ 0.39
SIX5Q8N196 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17.49■□□□□ 0.39
SIX5Q8N196 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SIX5Q8N196 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SIX5Q8N196 AL161645.1-201ENST00000622716 1255 ntBASIC17.49■□□□□ 0.39
SIX5Q8N196 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.49■□□□□ 0.39
SIX5Q8N196 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SIX5Q8N196 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIX5Q8N196 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIX5Q8N196 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIX5Q8N196 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIX5Q8N196 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIX5Q8N196 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIX5Q8N196 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.49■□□□□ 0.39
SIX5Q8N196 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SIX5Q8N196 AP000974.1-201ENST00000623909 2387 ntBASIC17.48■□□□□ 0.39
SIX5Q8N196 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIX5Q8N196 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.48■□□□□ 0.39
SIX5Q8N196 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SIX5Q8N196 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SIX5Q8N196 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.48■□□□□ 0.39
SIX5Q8N196 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIX5Q8N196 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
SIX5Q8N196 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.48■□□□□ 0.39
SIX5Q8N196 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SIX5Q8N196 AC097493.3-201ENST00000509725 367 ntBASIC17.48■□□□□ 0.39
SIX5Q8N196 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SIX5Q8N196 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.48■□□□□ 0.39
SIX5Q8N196 NOP2-220ENST00000545915 630 ntTSL 2 BASIC17.48■□□□□ 0.39
SIX5Q8N196 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SIX5Q8N196 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.48■□□□□ 0.39
SIX5Q8N196 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.48■□□□□ 0.39
SIX5Q8N196 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.48■□□□□ 0.39
SIX5Q8N196 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SIX5Q8N196 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
SIX5Q8N196 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms