Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF135Q8IUD6 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RNF135Q8IUD6 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RNF135Q8IUD6 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RNF135Q8IUD6 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.18■□□□□ 0.5
RNF135Q8IUD6 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF135Q8IUD6 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF135Q8IUD6 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RNF135Q8IUD6 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RNF135Q8IUD6 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF135Q8IUD6 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF135Q8IUD6 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
RNF135Q8IUD6 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RNF135Q8IUD6 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.18■□□□□ 0.5
RNF135Q8IUD6 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.18■□□□□ 0.5
RNF135Q8IUD6 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.18■□□□□ 0.5
RNF135Q8IUD6 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RNF135Q8IUD6 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.18■□□□□ 0.5
RNF135Q8IUD6 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RNF135Q8IUD6 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.18■□□□□ 0.5
RNF135Q8IUD6 REXO1L3P-201ENST00000622202 1288 ntBASIC18.18■□□□□ 0.5
RNF135Q8IUD6 AL121761.2-201ENST00000598007 1648 ntBASIC18.18■□□□□ 0.5
RNF135Q8IUD6 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF135Q8IUD6 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
RNF135Q8IUD6 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF135Q8IUD6 AC138028.4-201ENST00000564984 1845 ntBASIC18.18■□□□□ 0.5
RNF135Q8IUD6 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
RNF135Q8IUD6 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF135Q8IUD6 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
RNF135Q8IUD6 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
RNF135Q8IUD6 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.18■□□□□ 0.5
RNF135Q8IUD6 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF135Q8IUD6 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF135Q8IUD6 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.18■□□□□ 0.5
RNF135Q8IUD6 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF135Q8IUD6 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RNF135Q8IUD6 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RNF135Q8IUD6 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF135Q8IUD6 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF135Q8IUD6 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF135Q8IUD6 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
RNF135Q8IUD6 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RNF135Q8IUD6 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF135Q8IUD6 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF135Q8IUD6 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RNF135Q8IUD6 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF135Q8IUD6 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF135Q8IUD6 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF135Q8IUD6 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.17■□□□□ 0.5
RNF135Q8IUD6 AC002472.2-201ENST00000442739 958 ntBASIC18.17■□□□□ 0.5
RNF135Q8IUD6 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF135Q8IUD6 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.17■□□□□ 0.5
RNF135Q8IUD6 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.17■□□□□ 0.5
RNF135Q8IUD6 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.17■□□□□ 0.5
RNF135Q8IUD6 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.17■□□□□ 0.5
RNF135Q8IUD6 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.17■□□□□ 0.5
RNF135Q8IUD6 AC015911.4-201ENST00000588022 1070 ntBASIC18.17■□□□□ 0.5
RNF135Q8IUD6 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.17■□□□□ 0.5
RNF135Q8IUD6 AL008721.1-201ENST00000609964 604 ntBASIC18.17■□□□□ 0.5
RNF135Q8IUD6 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF135Q8IUD6 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.17■□□□□ 0.5
RNF135Q8IUD6 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF135Q8IUD6 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RNF135Q8IUD6 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF135Q8IUD6 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF135Q8IUD6 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.17■□□□□ 0.5
RNF135Q8IUD6 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF135Q8IUD6 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
RNF135Q8IUD6 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RNF135Q8IUD6 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RNF135Q8IUD6 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RNF135Q8IUD6 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF135Q8IUD6 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.16■□□□□ 0.5
RNF135Q8IUD6 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RNF135Q8IUD6 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF135Q8IUD6 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF135Q8IUD6 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.16■□□□□ 0.5
RNF135Q8IUD6 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.16■□□□□ 0.5
RNF135Q8IUD6 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.16■□□□□ 0.5
RNF135Q8IUD6 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC18.16■□□□□ 0.5
RNF135Q8IUD6 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF135Q8IUD6 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.16■□□□□ 0.5
RNF135Q8IUD6 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF135Q8IUD6 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF135Q8IUD6 AL805961.1-202ENST00000641562 540 ntBASIC18.16■□□□□ 0.5
RNF135Q8IUD6 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
RNF135Q8IUD6 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
RNF135Q8IUD6 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RNF135Q8IUD6 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RNF135Q8IUD6 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.16■□□□□ 0.5
RNF135Q8IUD6 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RNF135Q8IUD6 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.16■□□□□ 0.5
RNF135Q8IUD6 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF135Q8IUD6 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF135Q8IUD6 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RNF135Q8IUD6 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF135Q8IUD6 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
RNF135Q8IUD6 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF135Q8IUD6 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RNF135Q8IUD6 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms