Protein–RNA interactions for Protein: Q6PJG6

BRAT1, BRCA1-associated ATM activator 1, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1Q6PJG6 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BRAT1Q6PJG6 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRAT1Q6PJG6 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BRAT1Q6PJG6 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
BRAT1Q6PJG6 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRAT1Q6PJG6 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRAT1Q6PJG6 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.11■□□□□ 0.33
BRAT1Q6PJG6 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BRAT1Q6PJG6 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BRAT1Q6PJG6 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.11■□□□□ 0.33
BRAT1Q6PJG6 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.11■□□□□ 0.33
BRAT1Q6PJG6 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BRAT1Q6PJG6 RHOQP3-201ENST00000437982 621 ntBASIC17.11■□□□□ 0.33
BRAT1Q6PJG6 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.11■□□□□ 0.33
BRAT1Q6PJG6 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.11■□□□□ 0.33
BRAT1Q6PJG6 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
BRAT1Q6PJG6 AC002347.1-201ENST00000569543 541 ntBASIC17.11■□□□□ 0.33
BRAT1Q6PJG6 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.11■□□□□ 0.33
BRAT1Q6PJG6 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.11■□□□□ 0.33
BRAT1Q6PJG6 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRAT1Q6PJG6 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BRAT1Q6PJG6 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRAT1Q6PJG6 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRAT1Q6PJG6 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRAT1Q6PJG6 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRAT1Q6PJG6 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.11■□□□□ 0.33
BRAT1Q6PJG6 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRAT1Q6PJG6 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRAT1Q6PJG6 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
BRAT1Q6PJG6 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.1■□□□□ 0.33
BRAT1Q6PJG6 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.1■□□□□ 0.33
BRAT1Q6PJG6 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
BRAT1Q6PJG6 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.1■□□□□ 0.33
BRAT1Q6PJG6 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRAT1Q6PJG6 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
BRAT1Q6PJG6 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
BRAT1Q6PJG6 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRAT1Q6PJG6 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRAT1Q6PJG6 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
BRAT1Q6PJG6 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRAT1Q6PJG6 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRAT1Q6PJG6 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRAT1Q6PJG6 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRAT1Q6PJG6 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRAT1Q6PJG6 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRAT1Q6PJG6 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRAT1Q6PJG6 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.1■□□□□ 0.33
BRAT1Q6PJG6 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.1■□□□□ 0.33
BRAT1Q6PJG6 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.1■□□□□ 0.33
BRAT1Q6PJG6 AC107918.2-201ENST00000530817 355 ntBASIC17.1■□□□□ 0.33
BRAT1Q6PJG6 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
BRAT1Q6PJG6 REXO1L3P-201ENST00000622202 1288 ntBASIC17.1■□□□□ 0.33
BRAT1Q6PJG6 AC007064.4-201ENST00000637740 555 ntBASIC17.1■□□□□ 0.33
BRAT1Q6PJG6 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRAT1Q6PJG6 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRAT1Q6PJG6 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRAT1Q6PJG6 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.1■□□□□ 0.33
BRAT1Q6PJG6 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
BRAT1Q6PJG6 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.1■□□□□ 0.33
BRAT1Q6PJG6 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
BRAT1Q6PJG6 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
BRAT1Q6PJG6 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.1■□□□□ 0.33
BRAT1Q6PJG6 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRAT1Q6PJG6 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
BRAT1Q6PJG6 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRAT1Q6PJG6 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRAT1Q6PJG6 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
BRAT1Q6PJG6 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
BRAT1Q6PJG6 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRAT1Q6PJG6 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.09■□□□□ 0.33
BRAT1Q6PJG6 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRAT1Q6PJG6 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRAT1Q6PJG6 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRAT1Q6PJG6 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRAT1Q6PJG6 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.09■□□□□ 0.33
BRAT1Q6PJG6 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
BRAT1Q6PJG6 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRAT1Q6PJG6 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRAT1Q6PJG6 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRAT1Q6PJG6 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRAT1Q6PJG6 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
BRAT1Q6PJG6 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.09■□□□□ 0.33
BRAT1Q6PJG6 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.09■□□□□ 0.33
BRAT1Q6PJG6 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.09■□□□□ 0.33
BRAT1Q6PJG6 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.09■□□□□ 0.33
BRAT1Q6PJG6 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.09■□□□□ 0.33
BRAT1Q6PJG6 AC018845.2-201ENST00000568326 409 ntBASIC17.09■□□□□ 0.33
BRAT1Q6PJG6 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
BRAT1Q6PJG6 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.09■□□□□ 0.33
BRAT1Q6PJG6 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
BRAT1Q6PJG6 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRAT1Q6PJG6 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRAT1Q6PJG6 AL021920.2-201ENST00000624828 1351 ntBASIC17.09■□□□□ 0.33
BRAT1Q6PJG6 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRAT1Q6PJG6 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.09■□□□□ 0.33
BRAT1Q6PJG6 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.09■□□□□ 0.33
BRAT1Q6PJG6 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRAT1Q6PJG6 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRAT1Q6PJG6 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.09■□□□□ 0.33
BRAT1Q6PJG6 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms