Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC15.79■□□□□ 0.12
TMEM53Q6P2H8 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
TMEM53Q6P2H8 DBP-204ENST00000599385 709 ntTSL 3 BASIC15.79■□□□□ 0.12
TMEM53Q6P2H8 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.79■□□□□ 0.12
TMEM53Q6P2H8 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM53Q6P2H8 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM53Q6P2H8 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM53Q6P2H8 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM53Q6P2H8 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM53Q6P2H8 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM53Q6P2H8 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM53Q6P2H8 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM53Q6P2H8 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.79■□□□□ 0.12
TMEM53Q6P2H8 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.79■□□□□ 0.12
TMEM53Q6P2H8 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM53Q6P2H8 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM53Q6P2H8 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TMEM53Q6P2H8 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM53Q6P2H8 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.78■□□□□ 0.12
TMEM53Q6P2H8 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM53Q6P2H8 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM53Q6P2H8 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM53Q6P2H8 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM53Q6P2H8 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM53Q6P2H8 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM53Q6P2H8 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM53Q6P2H8 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM53Q6P2H8 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.78■□□□□ 0.12
TMEM53Q6P2H8 AL353692.3-201ENST00000407031 1396 ntBASIC15.78■□□□□ 0.12
TMEM53Q6P2H8 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM53Q6P2H8 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM53Q6P2H8 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM53Q6P2H8 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM53Q6P2H8 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM53Q6P2H8 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM53Q6P2H8 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM53Q6P2H8 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
TMEM53Q6P2H8 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM53Q6P2H8 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM53Q6P2H8 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.78■□□□□ 0.12
TMEM53Q6P2H8 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC15.78■□□□□ 0.12
TMEM53Q6P2H8 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.78■□□□□ 0.12
TMEM53Q6P2H8 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.78■□□□□ 0.12
TMEM53Q6P2H8 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.78■□□□□ 0.12
TMEM53Q6P2H8 KRT18P35-201ENST00000510488 1269 ntBASIC15.78■□□□□ 0.12
TMEM53Q6P2H8 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC15.78■□□□□ 0.12
TMEM53Q6P2H8 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.78■□□□□ 0.12
TMEM53Q6P2H8 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.78■□□□□ 0.12
TMEM53Q6P2H8 AC005332.3-201ENST00000589904 676 ntBASIC15.78■□□□□ 0.12
TMEM53Q6P2H8 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
TMEM53Q6P2H8 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.78■□□□□ 0.12
TMEM53Q6P2H8 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM53Q6P2H8 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM53Q6P2H8 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM53Q6P2H8 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM53Q6P2H8 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.78■□□□□ 0.12
TMEM53Q6P2H8 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.78■□□□□ 0.12
TMEM53Q6P2H8 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM53Q6P2H8 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM53Q6P2H8 AL122018.1-201ENST00000446607 2310 ntBASIC15.78■□□□□ 0.12
TMEM53Q6P2H8 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM53Q6P2H8 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM53Q6P2H8 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
TMEM53Q6P2H8 AC144831.1-201ENST00000573312 2656 ntBASIC15.78■□□□□ 0.12
TMEM53Q6P2H8 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM53Q6P2H8 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM53Q6P2H8 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
TMEM53Q6P2H8 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TMEM53Q6P2H8 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM53Q6P2H8 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TMEM53Q6P2H8 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TMEM53Q6P2H8 AC106886.4-201ENST00000623557 2502 ntBASIC15.77■□□□□ 0.12
TMEM53Q6P2H8 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TMEM53Q6P2H8 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.77■□□□□ 0.12
TMEM53Q6P2H8 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TMEM53Q6P2H8 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TMEM53Q6P2H8 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
TMEM53Q6P2H8 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TMEM53Q6P2H8 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
TMEM53Q6P2H8 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
TMEM53Q6P2H8 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
TMEM53Q6P2H8 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.77■□□□□ 0.12
TMEM53Q6P2H8 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
TMEM53Q6P2H8 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.77■□□□□ 0.12
TMEM53Q6P2H8 Z83836.1-201ENST00000624605 1642 ntBASIC15.77■□□□□ 0.12
TMEM53Q6P2H8 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TMEM53Q6P2H8 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TMEM53Q6P2H8 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TMEM53Q6P2H8 KRT18P65-201ENST00000439811 1286 ntBASIC15.77■□□□□ 0.12
TMEM53Q6P2H8 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC15.77■□□□□ 0.12
TMEM53Q6P2H8 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
TMEM53Q6P2H8 SPDYE13P-201ENST00000445314 798 ntBASIC15.77■□□□□ 0.12
TMEM53Q6P2H8 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC15.77■□□□□ 0.12
TMEM53Q6P2H8 WDR6-223ENST00000627177 207 ntTSL 2 BASIC15.77■□□□□ 0.12
TMEM53Q6P2H8 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC15.77■□□□□ 0.12
TMEM53Q6P2H8 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
TMEM53Q6P2H8 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
TMEM53Q6P2H8 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
TMEM53Q6P2H8 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
TMEM53Q6P2H8 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms