Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC12.99□□□□□ -0.33
MRPL54Q6P161 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MRPL54Q6P161 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MRPL54Q6P161 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
MRPL54Q6P161 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
MRPL54Q6P161 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC12.99□□□□□ -0.33
MRPL54Q6P161 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC12.99□□□□□ -0.33
MRPL54Q6P161 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MRPL54Q6P161 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MRPL54Q6P161 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
MRPL54Q6P161 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
MRPL54Q6P161 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC12.99□□□□□ -0.33
MRPL54Q6P161 AC126177.1-201ENST00000547829 2218 ntBASIC12.98□□□□□ -0.33
MRPL54Q6P161 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC12.98□□□□□ -0.33
MRPL54Q6P161 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
MRPL54Q6P161 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
MRPL54Q6P161 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
MRPL54Q6P161 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
MRPL54Q6P161 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
MRPL54Q6P161 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
MRPL54Q6P161 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
MRPL54Q6P161 KRT8P7-201ENST00000533003 1432 ntBASIC12.98□□□□□ -0.33
MRPL54Q6P161 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
MRPL54Q6P161 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
MRPL54Q6P161 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
MRPL54Q6P161 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
MRPL54Q6P161 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
MRPL54Q6P161 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
MRPL54Q6P161 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
MRPL54Q6P161 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC12.98□□□□□ -0.33
MRPL54Q6P161 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
MRPL54Q6P161 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC12.98□□□□□ -0.33
MRPL54Q6P161 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
MRPL54Q6P161 MIR4758-201ENST00000577688 71 ntBASIC12.98□□□□□ -0.33
MRPL54Q6P161 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC12.98□□□□□ -0.33
MRPL54Q6P161 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
MRPL54Q6P161 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
MRPL54Q6P161 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
MRPL54Q6P161 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
MRPL54Q6P161 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
MRPL54Q6P161 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
MRPL54Q6P161 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
MRPL54Q6P161 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
MRPL54Q6P161 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
MRPL54Q6P161 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
MRPL54Q6P161 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
MRPL54Q6P161 TCAF2P1-201ENST00000291129 2421 ntBASIC12.98□□□□□ -0.33
MRPL54Q6P161 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
MRPL54Q6P161 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
MRPL54Q6P161 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
MRPL54Q6P161 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
MRPL54Q6P161 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
MRPL54Q6P161 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
MRPL54Q6P161 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC12.97□□□□□ -0.33
MRPL54Q6P161 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
MRPL54Q6P161 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
MRPL54Q6P161 LINC00167-201ENST00000530583 1419 ntBASIC12.97□□□□□ -0.33
MRPL54Q6P161 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
MRPL54Q6P161 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC12.97□□□□□ -0.33
MRPL54Q6P161 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
MRPL54Q6P161 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
MRPL54Q6P161 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC12.97□□□□□ -0.33
MRPL54Q6P161 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
MRPL54Q6P161 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
MRPL54Q6P161 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
MRPL54Q6P161 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
MRPL54Q6P161 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
MRPL54Q6P161 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
MRPL54Q6P161 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
MRPL54Q6P161 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
MRPL54Q6P161 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
MRPL54Q6P161 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
MRPL54Q6P161 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
MRPL54Q6P161 OR2I1P-209ENST00000641730 5365 ntBASIC12.97□□□□□ -0.33
MRPL54Q6P161 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
MRPL54Q6P161 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
MRPL54Q6P161 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
MRPL54Q6P161 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
MRPL54Q6P161 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
MRPL54Q6P161 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
MRPL54Q6P161 SLC29A4P1-201ENST00000398760 971 ntBASIC12.97□□□□□ -0.33
MRPL54Q6P161 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC12.97□□□□□ -0.33
MRPL54Q6P161 RPS2P4-201ENST00000476944 856 ntBASIC12.97□□□□□ -0.33
MRPL54Q6P161 AP002982.1-201ENST00000492365 877 ntBASIC12.97□□□□□ -0.33
MRPL54Q6P161 TK2-208ENST00000545043 1120 ntTSL 2 BASIC12.97□□□□□ -0.33
MRPL54Q6P161 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC12.97□□□□□ -0.33
MRPL54Q6P161 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC12.97□□□□□ -0.33
MRPL54Q6P161 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC12.97□□□□□ -0.33
MRPL54Q6P161 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
MRPL54Q6P161 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
MRPL54Q6P161 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC12.97□□□□□ -0.33
MRPL54Q6P161 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
MRPL54Q6P161 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC12.97□□□□□ -0.33
MRPL54Q6P161 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
MRPL54Q6P161 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
MRPL54Q6P161 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC12.97□□□□□ -0.33
MRPL54Q6P161 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC12.97□□□□□ -0.33
MRPL54Q6P161 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
MRPL54Q6P161 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC12.97□□□□□ -0.33
MRPL54Q6P161 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms