Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
TTC39BQ5VTQ0 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TTC39BQ5VTQ0 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TTC39BQ5VTQ0 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
TTC39BQ5VTQ0 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TTC39BQ5VTQ0 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.88■□□□□ 0.45
TTC39BQ5VTQ0 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.88■□□□□ 0.45
TTC39BQ5VTQ0 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.88■□□□□ 0.45
TTC39BQ5VTQ0 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TTC39BQ5VTQ0 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TTC39BQ5VTQ0 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TTC39BQ5VTQ0 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TTC39BQ5VTQ0 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TTC39BQ5VTQ0 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TTC39BQ5VTQ0 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TTC39BQ5VTQ0 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TTC39BQ5VTQ0 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.88■□□□□ 0.45
TTC39BQ5VTQ0 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.88■□□□□ 0.45
TTC39BQ5VTQ0 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.88■□□□□ 0.45
TTC39BQ5VTQ0 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.88■□□□□ 0.45
TTC39BQ5VTQ0 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.88■□□□□ 0.45
TTC39BQ5VTQ0 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.88■□□□□ 0.45
TTC39BQ5VTQ0 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.88■□□□□ 0.45
TTC39BQ5VTQ0 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.88■□□□□ 0.45
TTC39BQ5VTQ0 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.88■□□□□ 0.45
TTC39BQ5VTQ0 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.88■□□□□ 0.45
TTC39BQ5VTQ0 BX640515.1-201ENST00000617215 977 ntBASIC17.88■□□□□ 0.45
TTC39BQ5VTQ0 MIR1199-201ENST00000621445 119 ntBASIC17.88■□□□□ 0.45
TTC39BQ5VTQ0 AC004706.3-202ENST00000621574 984 ntBASIC17.88■□□□□ 0.45
TTC39BQ5VTQ0 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.88■□□□□ 0.45
TTC39BQ5VTQ0 PGM5P2-202ENST00000637225 1043 ntBASIC17.88■□□□□ 0.45
TTC39BQ5VTQ0 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
TTC39BQ5VTQ0 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TTC39BQ5VTQ0 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TTC39BQ5VTQ0 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TTC39BQ5VTQ0 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TTC39BQ5VTQ0 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TTC39BQ5VTQ0 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.88■□□□□ 0.45
TTC39BQ5VTQ0 AC097637.2-201ENST00000624096 1997 ntBASIC17.88■□□□□ 0.45
TTC39BQ5VTQ0 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TTC39BQ5VTQ0 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TTC39BQ5VTQ0 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TTC39BQ5VTQ0 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.87■□□□□ 0.45
TTC39BQ5VTQ0 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TTC39BQ5VTQ0 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TTC39BQ5VTQ0 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TTC39BQ5VTQ0 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
TTC39BQ5VTQ0 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TTC39BQ5VTQ0 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.87■□□□□ 0.45
TTC39BQ5VTQ0 KRT18P27-201ENST00000427733 1299 ntBASIC17.87■□□□□ 0.45
TTC39BQ5VTQ0 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
TTC39BQ5VTQ0 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.87■□□□□ 0.45
TTC39BQ5VTQ0 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.87■□□□□ 0.45
TTC39BQ5VTQ0 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.87■□□□□ 0.45
TTC39BQ5VTQ0 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.87■□□□□ 0.45
TTC39BQ5VTQ0 AL139424.1-201ENST00000607572 797 ntBASIC17.87■□□□□ 0.45
TTC39BQ5VTQ0 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TTC39BQ5VTQ0 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
TTC39BQ5VTQ0 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TTC39BQ5VTQ0 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TTC39BQ5VTQ0 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.87■□□□□ 0.45
TTC39BQ5VTQ0 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TTC39BQ5VTQ0 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.87■□□□□ 0.45
TTC39BQ5VTQ0 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.87■□□□□ 0.45
TTC39BQ5VTQ0 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
TTC39BQ5VTQ0 LYSMD4-203ENST00000378904 2122 ntBASIC17.87■□□□□ 0.45
TTC39BQ5VTQ0 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.87■□□□□ 0.45
TTC39BQ5VTQ0 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TTC39BQ5VTQ0 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TTC39BQ5VTQ0 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TTC39BQ5VTQ0 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.87■□□□□ 0.45
TTC39BQ5VTQ0 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TTC39BQ5VTQ0 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
TTC39BQ5VTQ0 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TTC39BQ5VTQ0 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TTC39BQ5VTQ0 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TTC39BQ5VTQ0 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TTC39BQ5VTQ0 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TTC39BQ5VTQ0 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TTC39BQ5VTQ0 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TTC39BQ5VTQ0 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TTC39BQ5VTQ0 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.86■□□□□ 0.45
TTC39BQ5VTQ0 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.86■□□□□ 0.45
TTC39BQ5VTQ0 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TTC39BQ5VTQ0 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TTC39BQ5VTQ0 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TTC39BQ5VTQ0 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.86■□□□□ 0.45
TTC39BQ5VTQ0 AL049840.3-201ENST00000602669 611 ntBASIC17.86■□□□□ 0.45
TTC39BQ5VTQ0 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.86■□□□□ 0.45
TTC39BQ5VTQ0 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TTC39BQ5VTQ0 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.86■□□□□ 0.45
TTC39BQ5VTQ0 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.86■□□□□ 0.45
TTC39BQ5VTQ0 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TTC39BQ5VTQ0 AC243591.1-201ENST00000452967 1364 ntBASIC17.86■□□□□ 0.45
TTC39BQ5VTQ0 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TTC39BQ5VTQ0 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TTC39BQ5VTQ0 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.86■□□□□ 0.45
TTC39BQ5VTQ0 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TTC39BQ5VTQ0 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TTC39BQ5VTQ0 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms