Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SHROOM1Q2M3G4 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHROOM1Q2M3G4 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.85■□□□□ 0.77
SHROOM1Q2M3G4 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHROOM1Q2M3G4 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHROOM1Q2M3G4 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHROOM1Q2M3G4 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHROOM1Q2M3G4 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SHROOM1Q2M3G4 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.85■□□□□ 0.77
SHROOM1Q2M3G4 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC19.85■□□□□ 0.77
SHROOM1Q2M3G4 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
SHROOM1Q2M3G4 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.85■□□□□ 0.77
SHROOM1Q2M3G4 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.85■□□□□ 0.77
SHROOM1Q2M3G4 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SHROOM1Q2M3G4 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SHROOM1Q2M3G4 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.85■□□□□ 0.77
SHROOM1Q2M3G4 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC19.85■□□□□ 0.77
SHROOM1Q2M3G4 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHROOM1Q2M3G4 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC19.85■□□□□ 0.77
SHROOM1Q2M3G4 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SHROOM1Q2M3G4 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHROOM1Q2M3G4 FRMD8P1-201ENST00000440433 1524 ntBASIC19.85■□□□□ 0.77
SHROOM1Q2M3G4 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SHROOM1Q2M3G4 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.85■□□□□ 0.77
SHROOM1Q2M3G4 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.85■□□□□ 0.77
SHROOM1Q2M3G4 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SHROOM1Q2M3G4 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHROOM1Q2M3G4 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.85■□□□□ 0.77
SHROOM1Q2M3G4 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHROOM1Q2M3G4 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHROOM1Q2M3G4 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHROOM1Q2M3G4 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHROOM1Q2M3G4 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHROOM1Q2M3G4 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
SHROOM1Q2M3G4 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHROOM1Q2M3G4 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC19.84■□□□□ 0.77
SHROOM1Q2M3G4 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHROOM1Q2M3G4 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHROOM1Q2M3G4 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHROOM1Q2M3G4 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHROOM1Q2M3G4 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.84■□□□□ 0.77
SHROOM1Q2M3G4 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.84■□□□□ 0.77
SHROOM1Q2M3G4 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHROOM1Q2M3G4 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
SHROOM1Q2M3G4 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.84■□□□□ 0.77
SHROOM1Q2M3G4 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC19.84■□□□□ 0.77
SHROOM1Q2M3G4 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.84■□□□□ 0.77
SHROOM1Q2M3G4 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.84■□□□□ 0.77
SHROOM1Q2M3G4 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SHROOM1Q2M3G4 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
SHROOM1Q2M3G4 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SHROOM1Q2M3G4 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
SHROOM1Q2M3G4 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHROOM1Q2M3G4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHROOM1Q2M3G4 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SHROOM1Q2M3G4 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHROOM1Q2M3G4 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SHROOM1Q2M3G4 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.83■□□□□ 0.77
SHROOM1Q2M3G4 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
SHROOM1Q2M3G4 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SHROOM1Q2M3G4 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
SHROOM1Q2M3G4 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SHROOM1Q2M3G4 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SHROOM1Q2M3G4 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SHROOM1Q2M3G4 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.83■□□□□ 0.77
SHROOM1Q2M3G4 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.83■□□□□ 0.77
SHROOM1Q2M3G4 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
SHROOM1Q2M3G4 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.83■□□□□ 0.77
SHROOM1Q2M3G4 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
SHROOM1Q2M3G4 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.83■□□□□ 0.77
SHROOM1Q2M3G4 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SHROOM1Q2M3G4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SHROOM1Q2M3G4 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
SHROOM1Q2M3G4 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
SHROOM1Q2M3G4 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SHROOM1Q2M3G4 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.83■□□□□ 0.77
SHROOM1Q2M3G4 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SHROOM1Q2M3G4 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SHROOM1Q2M3G4 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC19.83■□□□□ 0.77
SHROOM1Q2M3G4 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
SHROOM1Q2M3G4 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.83■□□□□ 0.76
SHROOM1Q2M3G4 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
SHROOM1Q2M3G4 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
SHROOM1Q2M3G4 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.83■□□□□ 0.76
SHROOM1Q2M3G4 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SHROOM1Q2M3G4 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC19.83■□□□□ 0.76
SHROOM1Q2M3G4 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SHROOM1Q2M3G4 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
SHROOM1Q2M3G4 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SHROOM1Q2M3G4 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
SHROOM1Q2M3G4 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.83■□□□□ 0.76
SHROOM1Q2M3G4 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
SHROOM1Q2M3G4 LINC00896-202ENST00000609602 2128 ntBASIC19.82■□□□□ 0.76
SHROOM1Q2M3G4 AC092053.1-201ENST00000605787 1936 ntBASIC19.82■□□□□ 0.76
SHROOM1Q2M3G4 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SHROOM1Q2M3G4 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SHROOM1Q2M3G4 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SHROOM1Q2M3G4 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SHROOM1Q2M3G4 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SHROOM1Q2M3G4 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms