Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.6■□□□□ 0.89
RFX7Q2KHR2 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFX7Q2KHR2 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFX7Q2KHR2 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
RFX7Q2KHR2 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFX7Q2KHR2 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RFX7Q2KHR2 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
RFX7Q2KHR2 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC20.6■□□□□ 0.89
RFX7Q2KHR2 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
RFX7Q2KHR2 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC20.6■□□□□ 0.89
RFX7Q2KHR2 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFX7Q2KHR2 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RFX7Q2KHR2 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC20.6■□□□□ 0.89
RFX7Q2KHR2 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFX7Q2KHR2 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RFX7Q2KHR2 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RFX7Q2KHR2 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC20.59■□□□□ 0.89
RFX7Q2KHR2 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC20.59■□□□□ 0.89
RFX7Q2KHR2 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC20.59■□□□□ 0.89
RFX7Q2KHR2 PUS1-205ENST00000535067 838 ntTSL 3 BASIC20.59■□□□□ 0.89
RFX7Q2KHR2 CYB561-216ENST00000582297 897 ntTSL 3 BASIC20.59■□□□□ 0.89
RFX7Q2KHR2 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC20.59■□□□□ 0.89
RFX7Q2KHR2 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC20.59■□□□□ 0.89
RFX7Q2KHR2 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
RFX7Q2KHR2 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RFX7Q2KHR2 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFX7Q2KHR2 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RFX7Q2KHR2 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFX7Q2KHR2 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC20.59■□□□□ 0.89
RFX7Q2KHR2 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC20.59■□□□□ 0.89
RFX7Q2KHR2 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RFX7Q2KHR2 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RFX7Q2KHR2 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFX7Q2KHR2 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFX7Q2KHR2 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
RFX7Q2KHR2 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RFX7Q2KHR2 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC20.59■□□□□ 0.89
RFX7Q2KHR2 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RFX7Q2KHR2 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
RFX7Q2KHR2 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFX7Q2KHR2 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC20.59■□□□□ 0.89
RFX7Q2KHR2 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC20.59■□□□□ 0.89
RFX7Q2KHR2 AC254562.1-201ENST00000417586 456 ntBASIC20.59■□□□□ 0.89
RFX7Q2KHR2 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC20.59■□□□□ 0.89
RFX7Q2KHR2 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
RFX7Q2KHR2 CFL1-202ENST00000524553 860 ntTSL 2 BASIC20.59■□□□□ 0.89
RFX7Q2KHR2 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC20.59■□□□□ 0.89
RFX7Q2KHR2 AC027612.4-201ENST00000605371 583 ntBASIC20.59■□□□□ 0.89
RFX7Q2KHR2 ACTL9-202ENST00000612068 1252 ntBASIC20.59■□□□□ 0.89
RFX7Q2KHR2 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
RFX7Q2KHR2 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
RFX7Q2KHR2 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RFX7Q2KHR2 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RFX7Q2KHR2 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RFX7Q2KHR2 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RFX7Q2KHR2 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RFX7Q2KHR2 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
RFX7Q2KHR2 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RFX7Q2KHR2 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
RFX7Q2KHR2 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RFX7Q2KHR2 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
RFX7Q2KHR2 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RFX7Q2KHR2 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RFX7Q2KHR2 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RFX7Q2KHR2 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
RFX7Q2KHR2 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RFX7Q2KHR2 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC20.58■□□□□ 0.88
RFX7Q2KHR2 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
RFX7Q2KHR2 SLC25A6P2-201ENST00000497974 877 ntBASIC20.58■□□□□ 0.88
RFX7Q2KHR2 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC20.58■□□□□ 0.88
RFX7Q2KHR2 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RFX7Q2KHR2 AL031432.2-201ENST00000566714 459 ntBASIC20.58■□□□□ 0.88
RFX7Q2KHR2 AL928711.1-201ENST00000570165 459 ntBASIC20.58■□□□□ 0.88
RFX7Q2KHR2 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC20.58■□□□□ 0.88
RFX7Q2KHR2 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RFX7Q2KHR2 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC20.58■□□□□ 0.88
RFX7Q2KHR2 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC20.58■□□□□ 0.88
RFX7Q2KHR2 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC20.58■□□□□ 0.88
RFX7Q2KHR2 REXO1L3P-201ENST00000622202 1288 ntBASIC20.58■□□□□ 0.88
RFX7Q2KHR2 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
RFX7Q2KHR2 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RFX7Q2KHR2 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC20.58■□□□□ 0.88
RFX7Q2KHR2 BCAR1-209ENST00000546196 1340 ntBASIC20.58■□□□□ 0.88
RFX7Q2KHR2 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RFX7Q2KHR2 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC20.58■□□□□ 0.88
RFX7Q2KHR2 KRT8P49-201ENST00000604166 1432 ntBASIC20.58■□□□□ 0.88
RFX7Q2KHR2 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RFX7Q2KHR2 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC20.58■□□□□ 0.88
RFX7Q2KHR2 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RFX7Q2KHR2 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
RFX7Q2KHR2 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RFX7Q2KHR2 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RFX7Q2KHR2 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RFX7Q2KHR2 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RFX7Q2KHR2 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RFX7Q2KHR2 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RFX7Q2KHR2 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RFX7Q2KHR2 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.57■□□□□ 0.88
RFX7Q2KHR2 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RFX7Q2KHR2 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms