Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ASIC1P78348 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
ASIC1P78348 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
ASIC1P78348 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
ASIC1P78348 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ASIC1P78348 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.13■□□□□ 0.65
ASIC1P78348 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.13■□□□□ 0.65
ASIC1P78348 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.13■□□□□ 0.65
ASIC1P78348 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ASIC1P78348 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.13■□□□□ 0.65
ASIC1P78348 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ASIC1P78348 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.13■□□□□ 0.65
ASIC1P78348 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.13■□□□□ 0.65
ASIC1P78348 AC008608.2-201ENST00000606089 416 ntBASIC19.13■□□□□ 0.65
ASIC1P78348 AL139288.1-201ENST00000623748 933 ntBASIC19.13■□□□□ 0.65
ASIC1P78348 AL022326.1-202ENST00000641533 845 ntBASIC19.13■□□□□ 0.65
ASIC1P78348 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ASIC1P78348 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
ASIC1P78348 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.13■□□□□ 0.65
ASIC1P78348 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ASIC1P78348 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ASIC1P78348 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ASIC1P78348 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ASIC1P78348 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ASIC1P78348 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.12■□□□□ 0.65
ASIC1P78348 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.12■□□□□ 0.65
ASIC1P78348 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC19.12■□□□□ 0.65
ASIC1P78348 AC084018.2-201ENST00000613093 2607 ntBASIC19.12■□□□□ 0.65
ASIC1P78348 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
ASIC1P78348 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.12■□□□□ 0.65
ASIC1P78348 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ASIC1P78348 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ASIC1P78348 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ASIC1P78348 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ASIC1P78348 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ASIC1P78348 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
ASIC1P78348 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ASIC1P78348 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ASIC1P78348 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ASIC1P78348 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ASIC1P78348 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ASIC1P78348 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
ASIC1P78348 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.12■□□□□ 0.65
ASIC1P78348 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.12■□□□□ 0.65
ASIC1P78348 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.12■□□□□ 0.65
ASIC1P78348 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.12■□□□□ 0.65
ASIC1P78348 AL355877.3-201ENST00000622820 899 ntBASIC19.12■□□□□ 0.65
ASIC1P78348 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
ASIC1P78348 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ASIC1P78348 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.12■□□□□ 0.65
ASIC1P78348 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ASIC1P78348 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ASIC1P78348 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC19.12■□□□□ 0.65
ASIC1P78348 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
ASIC1P78348 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ASIC1P78348 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ASIC1P78348 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ASIC1P78348 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
ASIC1P78348 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
ASIC1P78348 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ASIC1P78348 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.11■□□□□ 0.65
ASIC1P78348 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ASIC1P78348 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC19.11■□□□□ 0.65
ASIC1P78348 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.11■□□□□ 0.65
ASIC1P78348 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ASIC1P78348 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ASIC1P78348 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ASIC1P78348 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
ASIC1P78348 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ASIC1P78348 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ASIC1P78348 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.11■□□□□ 0.65
ASIC1P78348 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
ASIC1P78348 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.11■□□□□ 0.65
ASIC1P78348 REXO1L6P-202ENST00000619970 1078 ntBASIC19.11■□□□□ 0.65
ASIC1P78348 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ASIC1P78348 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC19.11■□□□□ 0.65
ASIC1P78348 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.11■□□□□ 0.65
ASIC1P78348 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ASIC1P78348 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ASIC1P78348 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ASIC1P78348 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ASIC1P78348 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ASIC1P78348 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ASIC1P78348 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ASIC1P78348 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
ASIC1P78348 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ASIC1P78348 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ASIC1P78348 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ASIC1P78348 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ASIC1P78348 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.1■□□□□ 0.65
ASIC1P78348 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ASIC1P78348 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
ASIC1P78348 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ASIC1P78348 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ASIC1P78348 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.1■□□□□ 0.65
ASIC1P78348 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
ASIC1P78348 AKR1C7P-201ENST00000305623 895 ntBASIC19.1■□□□□ 0.65
ASIC1P78348 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ASIC1P78348 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ASIC1P78348 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms