Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC22.36■■□□□ 1.17
RIPK4P57078 MAL2-202ENST00000531508 892 ntTSL 3 BASIC22.36■■□□□ 1.17
RIPK4P57078 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RIPK4P57078 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC22.36■■□□□ 1.17
RIPK4P57078 ACTL9-202ENST00000612068 1252 ntBASIC22.36■■□□□ 1.17
RIPK4P57078 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC22.36■■□□□ 1.17
RIPK4P57078 AC092865.6-201ENST00000642101 219 ntBASIC22.36■■□□□ 1.17
RIPK4P57078 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RIPK4P57078 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC22.36■■□□□ 1.17
RIPK4P57078 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC22.36■■□□□ 1.17
RIPK4P57078 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC22.36■■□□□ 1.17
RIPK4P57078 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
RIPK4P57078 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
RIPK4P57078 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RIPK4P57078 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RIPK4P57078 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC22.36■■□□□ 1.17
RIPK4P57078 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
RIPK4P57078 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC22.36■■□□□ 1.17
RIPK4P57078 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
RIPK4P57078 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RIPK4P57078 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RIPK4P57078 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
RIPK4P57078 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RIPK4P57078 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RIPK4P57078 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RIPK4P57078 AC129492.6-201ENST00000611383 1305 ntBASIC22.35■■□□□ 1.17
RIPK4P57078 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RIPK4P57078 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC22.35■■□□□ 1.17
RIPK4P57078 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
RIPK4P57078 AC092068.3-201ENST00000587894 2016 ntBASIC22.35■■□□□ 1.17
RIPK4P57078 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RIPK4P57078 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RIPK4P57078 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
RIPK4P57078 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
RIPK4P57078 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC22.35■■□□□ 1.17
RIPK4P57078 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RIPK4P57078 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC22.35■■□□□ 1.17
RIPK4P57078 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RIPK4P57078 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC22.35■■□□□ 1.17
RIPK4P57078 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC22.35■■□□□ 1.17
RIPK4P57078 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC22.35■■□□□ 1.17
RIPK4P57078 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC22.35■■□□□ 1.17
RIPK4P57078 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC22.35■■□□□ 1.17
RIPK4P57078 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
RIPK4P57078 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RIPK4P57078 AP001094.4-201ENST00000579008 2176 ntBASIC22.35■■□□□ 1.17
RIPK4P57078 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC22.35■■□□□ 1.17
RIPK4P57078 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RIPK4P57078 PC-214ENST00000628663 1470 ntTSL 5 BASIC22.34■■□□□ 1.17
RIPK4P57078 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC22.34■■□□□ 1.17
RIPK4P57078 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RIPK4P57078 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
RIPK4P57078 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC22.34■■□□□ 1.17
RIPK4P57078 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC22.34■■□□□ 1.17
RIPK4P57078 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC22.34■■□□□ 1.17
RIPK4P57078 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RIPK4P57078 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
RIPK4P57078 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RIPK4P57078 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC22.34■■□□□ 1.17
RIPK4P57078 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC22.34■■□□□ 1.17
RIPK4P57078 AC124947.2-201ENST00000547118 1133 ntBASIC22.34■■□□□ 1.17
RIPK4P57078 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC22.34■■□□□ 1.17
RIPK4P57078 AQP6-205ENST00000618286 829 ntTSL 5 BASIC22.34■■□□□ 1.17
RIPK4P57078 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC22.34■■□□□ 1.17
RIPK4P57078 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RIPK4P57078 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RIPK4P57078 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC22.33■■□□□ 1.17
RIPK4P57078 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC22.33■■□□□ 1.17
RIPK4P57078 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC22.33■■□□□ 1.17
RIPK4P57078 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
RIPK4P57078 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RIPK4P57078 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC22.33■■□□□ 1.17
RIPK4P57078 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RIPK4P57078 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC22.33■■□□□ 1.17
RIPK4P57078 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC22.33■■□□□ 1.17
RIPK4P57078 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
RIPK4P57078 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC22.33■■□□□ 1.17
RIPK4P57078 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC22.33■■□□□ 1.17
RIPK4P57078 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC22.33■■□□□ 1.17
RIPK4P57078 AC040169.1-201ENST00000565382 521 ntBASIC22.33■■□□□ 1.17
RIPK4P57078 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC22.33■■□□□ 1.17
RIPK4P57078 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RIPK4P57078 AL513190.1-201ENST00000621254 727 ntBASIC22.33■■□□□ 1.17
RIPK4P57078 AC004877.2-201ENST00000623941 599 ntBASIC22.33■■□□□ 1.17
RIPK4P57078 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC22.33■■□□□ 1.17
RIPK4P57078 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RIPK4P57078 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
RIPK4P57078 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.16
RIPK4P57078 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
RIPK4P57078 AC012313.1-201ENST00000593393 3059 ntBASIC22.33■■□□□ 1.16
RIPK4P57078 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.16
RIPK4P57078 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
RIPK4P57078 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC22.33■■□□□ 1.16
RIPK4P57078 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC22.33■■□□□ 1.16
RIPK4P57078 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
RIPK4P57078 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
RIPK4P57078 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.16
RIPK4P57078 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RIPK4P57078 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC22.32■■□□□ 1.16
RIPK4P57078 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms