Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC079328.2-201ENST00000561241 3354 ntBASIC16.3■□□□□ 0.2
NR1H2P55055 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.3■□□□□ 0.2
NR1H2P55055 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NR1H2P55055 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.3■□□□□ 0.2
NR1H2P55055 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NR1H2P55055 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NR1H2P55055 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NR1H2P55055 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NR1H2P55055 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.3■□□□□ 0.2
NR1H2P55055 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.3■□□□□ 0.2
NR1H2P55055 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.3■□□□□ 0.2
NR1H2P55055 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
NR1H2P55055 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
NR1H2P55055 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.3■□□□□ 0.2
NR1H2P55055 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.3■□□□□ 0.2
NR1H2P55055 MIR3180-5-201ENST00000583743 153 ntBASIC16.3■□□□□ 0.2
NR1H2P55055 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NR1H2P55055 AC069148.1-201ENST00000608741 768 ntBASIC16.3■□□□□ 0.2
NR1H2P55055 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NR1H2P55055 AC116407.4-201ENST00000623319 1061 ntBASIC16.3■□□□□ 0.2
NR1H2P55055 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NR1H2P55055 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NR1H2P55055 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.3■□□□□ 0.2
NR1H2P55055 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
NR1H2P55055 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NR1H2P55055 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NR1H2P55055 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
NR1H2P55055 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NR1H2P55055 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
NR1H2P55055 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.3■□□□□ 0.2
NR1H2P55055 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
NR1H2P55055 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
NR1H2P55055 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.3■□□□□ 0.2
NR1H2P55055 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
NR1H2P55055 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR1H2P55055 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NR1H2P55055 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR1H2P55055 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
NR1H2P55055 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.29■□□□□ 0.2
NR1H2P55055 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
NR1H2P55055 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.29■□□□□ 0.2
NR1H2P55055 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR1H2P55055 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.29■□□□□ 0.2
NR1H2P55055 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR1H2P55055 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.29■□□□□ 0.2
NR1H2P55055 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR1H2P55055 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
NR1H2P55055 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR1H2P55055 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.29■□□□□ 0.2
NR1H2P55055 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR1H2P55055 PKD1P5-201ENST00000532415 10291 ntBASIC16.29■□□□□ 0.2
NR1H2P55055 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR1H2P55055 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR1H2P55055 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR1H2P55055 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR1H2P55055 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NR1H2P55055 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NR1H2P55055 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NR1H2P55055 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.29■□□□□ 0.2
NR1H2P55055 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.29■□□□□ 0.2
NR1H2P55055 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.29■□□□□ 0.2
NR1H2P55055 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.29■□□□□ 0.2
NR1H2P55055 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR1H2P55055 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NR1H2P55055 AC092384.3-202ENST00000564646 2873 ntBASIC16.29■□□□□ 0.2
NR1H2P55055 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR1H2P55055 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR1H2P55055 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR1H2P55055 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
NR1H2P55055 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NR1H2P55055 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR1H2P55055 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NR1H2P55055 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.29■□□□□ 0.2
NR1H2P55055 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
NR1H2P55055 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR1H2P55055 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.29■□□□□ 0.2
NR1H2P55055 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NR1H2P55055 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.28■□□□□ 0.2
NR1H2P55055 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NR1H2P55055 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
NR1H2P55055 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
NR1H2P55055 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NR1H2P55055 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NR1H2P55055 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NR1H2P55055 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NR1H2P55055 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NR1H2P55055 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
NR1H2P55055 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NR1H2P55055 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
NR1H2P55055 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.28■□□□□ 0.2
NR1H2P55055 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.28■□□□□ 0.2
NR1H2P55055 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NR1H2P55055 SDHAP2-201ENST00000455183 2001 ntBASIC16.28■□□□□ 0.2
NR1H2P55055 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NR1H2P55055 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NR1H2P55055 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.28■□□□□ 0.2
NR1H2P55055 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
NR1H2P55055 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
NR1H2P55055 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NR1H2P55055 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms