Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC20.17■□□□□ 0.82
CACNB3P54284 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CACNB3P54284 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.17■□□□□ 0.82
CACNB3P54284 HARS-204ENST00000438307 1789 ntTSL 2 BASIC20.17■□□□□ 0.82
CACNB3P54284 SLC25A1P3-201ENST00000395415 828 ntBASIC20.17■□□□□ 0.82
CACNB3P54284 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC20.17■□□□□ 0.82
CACNB3P54284 RPL30-202ENST00000396070 440 ntTSL 2 BASIC20.17■□□□□ 0.82
CACNB3P54284 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CACNB3P54284 AC067863.1-201ENST00000494933 530 ntBASIC20.17■□□□□ 0.82
CACNB3P54284 IGHV3-62-201ENST00000520057 340 ntBASIC20.17■□□□□ 0.82
CACNB3P54284 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CACNB3P54284 AQP6-203ENST00000551733 849 ntTSL 3 BASIC20.17■□□□□ 0.82
CACNB3P54284 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CACNB3P54284 AC026150.2-201ENST00000564693 1156 ntBASIC20.17■□□□□ 0.82
CACNB3P54284 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CACNB3P54284 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CACNB3P54284 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CACNB3P54284 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC20.17■□□□□ 0.82
CACNB3P54284 AP001059.3-201ENST00000619053 235 ntBASIC20.17■□□□□ 0.82
CACNB3P54284 BSG-215ENST00000618006 1329 ntTSL 2 BASIC20.17■□□□□ 0.82
CACNB3P54284 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
CACNB3P54284 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CACNB3P54284 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.17■□□□□ 0.82
CACNB3P54284 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.17■□□□□ 0.82
CACNB3P54284 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CACNB3P54284 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CACNB3P54284 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CACNB3P54284 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CACNB3P54284 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CACNB3P54284 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CACNB3P54284 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CACNB3P54284 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.16■□□□□ 0.82
CACNB3P54284 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC20.16■□□□□ 0.82
CACNB3P54284 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
CACNB3P54284 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CACNB3P54284 AC055876.3-201ENST00000431496 288 ntBASIC20.16■□□□□ 0.82
CACNB3P54284 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC20.16■□□□□ 0.82
CACNB3P54284 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CACNB3P54284 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CACNB3P54284 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC20.16■□□□□ 0.82
CACNB3P54284 AC138649.4-201ENST00000612222 287 ntBASIC20.16■□□□□ 0.82
CACNB3P54284 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC20.16■□□□□ 0.82
CACNB3P54284 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CACNB3P54284 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CACNB3P54284 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CACNB3P54284 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC20.16■□□□□ 0.82
CACNB3P54284 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CACNB3P54284 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CACNB3P54284 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CACNB3P54284 GNAS-203ENST00000306120 1878 ntBASIC20.16■□□□□ 0.82
CACNB3P54284 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.15■□□□□ 0.82
CACNB3P54284 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC20.15■□□□□ 0.82
CACNB3P54284 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CACNB3P54284 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC20.15■□□□□ 0.82
CACNB3P54284 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CACNB3P54284 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
CACNB3P54284 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CACNB3P54284 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CACNB3P54284 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CACNB3P54284 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC20.15■□□□□ 0.82
CACNB3P54284 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CACNB3P54284 MIR661-201ENST00000384842 89 ntBASIC20.15■□□□□ 0.82
CACNB3P54284 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC20.15■□□□□ 0.82
CACNB3P54284 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CACNB3P54284 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC20.15■□□□□ 0.82
CACNB3P54284 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CACNB3P54284 SPDYE14P-201ENST00000442619 822 ntBASIC20.15■□□□□ 0.82
CACNB3P54284 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC20.15■□□□□ 0.82
CACNB3P54284 KLF2P3-201ENST00000451977 1087 ntBASIC20.15■□□□□ 0.82
CACNB3P54284 UGT1A2P-201ENST00000454886 866 ntBASIC20.15■□□□□ 0.82
CACNB3P54284 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CACNB3P54284 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC20.15■□□□□ 0.82
CACNB3P54284 SLC25A39P2-201ENST00000537614 270 ntBASIC20.15■□□□□ 0.82
CACNB3P54284 AL512356.2-201ENST00000546955 174 ntBASIC20.15■□□□□ 0.82
CACNB3P54284 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC20.15■□□□□ 0.82
CACNB3P54284 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC20.15■□□□□ 0.82
CACNB3P54284 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC20.15■□□□□ 0.82
CACNB3P54284 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC20.15■□□□□ 0.82
CACNB3P54284 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC20.15■□□□□ 0.82
CACNB3P54284 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC20.15■□□□□ 0.82
CACNB3P54284 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CACNB3P54284 FO538757.1-201ENST00000623083 1397 ntBASIC20.15■□□□□ 0.82
CACNB3P54284 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CACNB3P54284 AL353732.1-201ENST00000569618 1459 ntBASIC20.15■□□□□ 0.82
CACNB3P54284 EGFEM1P-202ENST00000431685 1563 ntBASIC20.15■□□□□ 0.82
CACNB3P54284 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CACNB3P54284 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CACNB3P54284 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CACNB3P54284 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC20.15■□□□□ 0.82
CACNB3P54284 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
CACNB3P54284 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.15■□□□□ 0.82
CACNB3P54284 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CACNB3P54284 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CACNB3P54284 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CACNB3P54284 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.14■□□□□ 0.81
CACNB3P54284 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CACNB3P54284 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC20.14■□□□□ 0.81
CACNB3P54284 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.14■□□□□ 0.81
CACNB3P54284 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CACNB3P54284 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms