Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLCN3P51790 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLCN3P51790 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLCN3P51790 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CLCN3P51790 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
CLCN3P51790 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.75■□□□□ 0.59
CLCN3P51790 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLCN3P51790 KRT18P28-201ENST00000453838 1332 ntBASIC18.74■□□□□ 0.59
CLCN3P51790 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.74■□□□□ 0.59
CLCN3P51790 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLCN3P51790 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.74■□□□□ 0.59
CLCN3P51790 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLCN3P51790 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLCN3P51790 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLCN3P51790 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLCN3P51790 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CLCN3P51790 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CLCN3P51790 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.74■□□□□ 0.59
CLCN3P51790 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
CLCN3P51790 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLCN3P51790 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLCN3P51790 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.74■□□□□ 0.59
CLCN3P51790 METTL21AP1-201ENST00000438852 635 ntBASIC18.74■□□□□ 0.59
CLCN3P51790 ACTG1P14-201ENST00000446382 1122 ntBASIC18.74■□□□□ 0.59
CLCN3P51790 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.74■□□□□ 0.59
CLCN3P51790 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.74■□□□□ 0.59
CLCN3P51790 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.74■□□□□ 0.59
CLCN3P51790 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.74■□□□□ 0.59
CLCN3P51790 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CLCN3P51790 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.74■□□□□ 0.59
CLCN3P51790 AL645728.2-201ENST00000641974 660 ntBASIC18.74■□□□□ 0.59
CLCN3P51790 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLCN3P51790 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.74■□□□□ 0.59
CLCN3P51790 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLCN3P51790 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLCN3P51790 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLCN3P51790 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLCN3P51790 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLCN3P51790 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLCN3P51790 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLCN3P51790 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.73■□□□□ 0.59
CLCN3P51790 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CLCN3P51790 LINC00896-202ENST00000609602 2128 ntBASIC18.73■□□□□ 0.59
CLCN3P51790 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLCN3P51790 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLCN3P51790 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLCN3P51790 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLCN3P51790 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CLCN3P51790 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLCN3P51790 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLCN3P51790 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLCN3P51790 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CLCN3P51790 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.73■□□□□ 0.59
CLCN3P51790 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLCN3P51790 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.73■□□□□ 0.59
CLCN3P51790 AC112191.1-201ENST00000523689 701 ntBASIC18.73■□□□□ 0.59
CLCN3P51790 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.73■□□□□ 0.59
CLCN3P51790 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.73■□□□□ 0.59
CLCN3P51790 MIR4515-201ENST00000584082 81 ntBASIC18.73■□□□□ 0.59
CLCN3P51790 AC027612.4-201ENST00000605371 583 ntBASIC18.73■□□□□ 0.59
CLCN3P51790 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLCN3P51790 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLCN3P51790 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLCN3P51790 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.73■□□□□ 0.59
CLCN3P51790 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLCN3P51790 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CLCN3P51790 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CLCN3P51790 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLCN3P51790 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLCN3P51790 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCN3P51790 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCN3P51790 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCN3P51790 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
CLCN3P51790 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCN3P51790 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCN3P51790 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CLCN3P51790 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.72■□□□□ 0.59
CLCN3P51790 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCN3P51790 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCN3P51790 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCN3P51790 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCN3P51790 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.72■□□□□ 0.59
CLCN3P51790 HMGA1P7-201ENST00000406908 502 ntBASIC18.72■□□□□ 0.59
CLCN3P51790 AC140658.5-201ENST00000438532 169 ntBASIC18.72■□□□□ 0.59
CLCN3P51790 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.72■□□□□ 0.59
CLCN3P51790 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.72■□□□□ 0.59
CLCN3P51790 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC18.72■□□□□ 0.59
CLCN3P51790 IGHV3OR16-6-201ENST00000568775 360 ntBASIC18.72■□□□□ 0.59
CLCN3P51790 AC005412.3-201ENST00000580309 715 ntBASIC18.72■□□□□ 0.59
CLCN3P51790 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.72■□□□□ 0.59
CLCN3P51790 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.72■□□□□ 0.59
CLCN3P51790 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.72■□□□□ 0.59
CLCN3P51790 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLCN3P51790 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CLCN3P51790 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
CLCN3P51790 FRMD8P1-201ENST00000440433 1524 ntBASIC18.72■□□□□ 0.59
CLCN3P51790 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCN3P51790 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCN3P51790 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.72■□□□□ 0.59
CLCN3P51790 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms