Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCNN1AP37088 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCNN1AP37088 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCNN1AP37088 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCNN1AP37088 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCNN1AP37088 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCNN1AP37088 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SCNN1AP37088 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.78■□□□□ 0.44
SCNN1AP37088 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCNN1AP37088 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.78■□□□□ 0.44
SCNN1AP37088 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SCNN1AP37088 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCNN1AP37088 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SCNN1AP37088 AC005915.1-201ENST00000624912 2018 ntBASIC17.77■□□□□ 0.44
SCNN1AP37088 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SCNN1AP37088 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCNN1AP37088 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
SCNN1AP37088 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.77■□□□□ 0.44
SCNN1AP37088 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCNN1AP37088 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCNN1AP37088 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCNN1AP37088 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SCNN1AP37088 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCNN1AP37088 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCNN1AP37088 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SCNN1AP37088 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
SCNN1AP37088 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCNN1AP37088 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.77■□□□□ 0.44
SCNN1AP37088 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.77■□□□□ 0.44
SCNN1AP37088 AC108751.1-201ENST00000490852 363 ntBASIC17.77■□□□□ 0.44
SCNN1AP37088 UNC93B6-202ENST00000528242 690 ntBASIC17.77■□□□□ 0.44
SCNN1AP37088 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.77■□□□□ 0.44
SCNN1AP37088 OR7E47P-204ENST00000575924 449 ntBASIC17.77■□□□□ 0.44
SCNN1AP37088 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
SCNN1AP37088 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCNN1AP37088 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCNN1AP37088 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.77■□□□□ 0.44
SCNN1AP37088 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.77■□□□□ 0.44
SCNN1AP37088 AL139011.1-202ENST00000642063 584 ntBASIC17.77■□□□□ 0.44
SCNN1AP37088 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCNN1AP37088 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.77■□□□□ 0.43
SCNN1AP37088 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SCNN1AP37088 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.77■□□□□ 0.43
SCNN1AP37088 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
SCNN1AP37088 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.77■□□□□ 0.43
SCNN1AP37088 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.77■□□□□ 0.43
SCNN1AP37088 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.77■□□□□ 0.43
SCNN1AP37088 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SCNN1AP37088 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SCNN1AP37088 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SCNN1AP37088 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SCNN1AP37088 PCDHB17P-201ENST00000539533 2393 ntBASIC17.76■□□□□ 0.43
SCNN1AP37088 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SCNN1AP37088 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.76■□□□□ 0.43
SCNN1AP37088 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
SCNN1AP37088 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCNN1AP37088 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.76■□□□□ 0.43
SCNN1AP37088 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
SCNN1AP37088 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCNN1AP37088 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCNN1AP37088 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCNN1AP37088 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
SCNN1AP37088 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCNN1AP37088 AC009947.1-201ENST00000444350 727 ntBASIC17.76■□□□□ 0.43
SCNN1AP37088 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.76■□□□□ 0.43
SCNN1AP37088 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.76■□□□□ 0.43
SCNN1AP37088 AC145285.3-201ENST00000564603 959 ntBASIC17.76■□□□□ 0.43
SCNN1AP37088 AC005412.3-201ENST00000580309 715 ntBASIC17.76■□□□□ 0.43
SCNN1AP37088 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.76■□□□□ 0.43
SCNN1AP37088 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.76■□□□□ 0.43
SCNN1AP37088 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SCNN1AP37088 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCNN1AP37088 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SCNN1AP37088 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCNN1AP37088 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCNN1AP37088 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCNN1AP37088 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCNN1AP37088 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCNN1AP37088 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCNN1AP37088 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SCNN1AP37088 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.75■□□□□ 0.43
SCNN1AP37088 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SCNN1AP37088 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
SCNN1AP37088 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SCNN1AP37088 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.75■□□□□ 0.43
SCNN1AP37088 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCNN1AP37088 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCNN1AP37088 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SCNN1AP37088 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SCNN1AP37088 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCNN1AP37088 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
SCNN1AP37088 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
SCNN1AP37088 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCNN1AP37088 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.75■□□□□ 0.43
SCNN1AP37088 RNA5SP415-201ENST00000517246 115 ntBASIC17.75■□□□□ 0.43
SCNN1AP37088 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.75■□□□□ 0.43
SCNN1AP37088 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.75■□□□□ 0.43
SCNN1AP37088 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.75■□□□□ 0.43
SCNN1AP37088 MIR4492-201ENST00000581627 80 ntBASIC17.75■□□□□ 0.43
SCNN1AP37088 MPDU1-223ENST00000582151 728 ntBASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms