Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.52■□□□□ 0.08
GDF1P27539 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
GDF1P27539 IGLL3P-201ENST00000412472 434 ntBASIC15.52■□□□□ 0.08
GDF1P27539 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.52■□□□□ 0.08
GDF1P27539 DNAJB3-201ENST00000446806 729 ntBASIC15.52■□□□□ 0.08
GDF1P27539 PAWRP1-201ENST00000451083 565 ntBASIC15.52■□□□□ 0.08
GDF1P27539 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.52■□□□□ 0.08
GDF1P27539 AC087163.2-201ENST00000457299 853 ntBASIC15.52■□□□□ 0.08
GDF1P27539 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
GDF1P27539 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
GDF1P27539 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.52■□□□□ 0.08
GDF1P27539 OR7E47P-204ENST00000575924 449 ntBASIC15.52■□□□□ 0.08
GDF1P27539 MIR3687-2-201ENST00000577708 61 ntBASIC15.52■□□□□ 0.08
GDF1P27539 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.52■□□□□ 0.08
GDF1P27539 MIR3687-1-201ENST00000614492 61 ntBASIC15.52■□□□□ 0.08
GDF1P27539 AC010507.1-201ENST00000633895 436 ntBASIC15.52■□□□□ 0.08
GDF1P27539 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.52■□□□□ 0.08
GDF1P27539 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
GDF1P27539 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
GDF1P27539 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
GDF1P27539 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC15.52■□□□□ 0.07
GDF1P27539 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.52■□□□□ 0.07
GDF1P27539 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
GDF1P27539 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
GDF1P27539 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.52■□□□□ 0.07
GDF1P27539 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC15.52■□□□□ 0.07
GDF1P27539 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
GDF1P27539 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
GDF1P27539 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
GDF1P27539 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.51■□□□□ 0.07
GDF1P27539 AC093525.9-201ENST00000624961 1746 ntBASIC15.51■□□□□ 0.07
GDF1P27539 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.51■□□□□ 0.07
GDF1P27539 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GDF1P27539 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.51■□□□□ 0.07
GDF1P27539 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
GDF1P27539 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.51■□□□□ 0.07
GDF1P27539 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
GDF1P27539 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
GDF1P27539 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
GDF1P27539 EGFEM1P-202ENST00000431685 1563 ntBASIC15.51■□□□□ 0.07
GDF1P27539 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
GDF1P27539 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GDF1P27539 YBX2P1-201ENST00000394192 760 ntBASIC15.51■□□□□ 0.07
GDF1P27539 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.51■□□□□ 0.07
GDF1P27539 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
GDF1P27539 AC004832.2-201ENST00000426397 482 ntBASIC15.51■□□□□ 0.07
GDF1P27539 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.51■□□□□ 0.07
GDF1P27539 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.51■□□□□ 0.07
GDF1P27539 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.51■□□□□ 0.07
GDF1P27539 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.51■□□□□ 0.07
GDF1P27539 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.51■□□□□ 0.07
GDF1P27539 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
GDF1P27539 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.51■□□□□ 0.07
GDF1P27539 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.51■□□□□ 0.07
GDF1P27539 AC010327.4-202ENST00000591484 748 ntBASIC15.51■□□□□ 0.07
GDF1P27539 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.51■□□□□ 0.07
GDF1P27539 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.51■□□□□ 0.07
GDF1P27539 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GDF1P27539 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GDF1P27539 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
GDF1P27539 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GDF1P27539 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.51■□□□□ 0.07
GDF1P27539 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GDF1P27539 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.51■□□□□ 0.07
GDF1P27539 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GDF1P27539 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GDF1P27539 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GDF1P27539 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.51■□□□□ 0.07
GDF1P27539 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GDF1P27539 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.51■□□□□ 0.07
GDF1P27539 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
GDF1P27539 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GDF1P27539 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
GDF1P27539 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
GDF1P27539 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
GDF1P27539 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
GDF1P27539 BCAR1-209ENST00000546196 1340 ntBASIC15.5■□□□□ 0.07
GDF1P27539 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GDF1P27539 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GDF1P27539 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
GDF1P27539 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.5■□□□□ 0.07
GDF1P27539 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.5■□□□□ 0.07
GDF1P27539 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.5■□□□□ 0.07
GDF1P27539 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.5■□□□□ 0.07
GDF1P27539 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.5■□□□□ 0.07
GDF1P27539 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.5■□□□□ 0.07
GDF1P27539 CXCL1P1-201ENST00000502804 216 ntBASIC15.5■□□□□ 0.07
GDF1P27539 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.5■□□□□ 0.07
GDF1P27539 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
GDF1P27539 AC096734.2-201ENST00000562054 433 ntBASIC15.5■□□□□ 0.07
GDF1P27539 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.5■□□□□ 0.07
GDF1P27539 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.5■□□□□ 0.07
GDF1P27539 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.5■□□□□ 0.07
GDF1P27539 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.5■□□□□ 0.07
GDF1P27539 AC006538.3-201ENST00000612495 578 ntBASIC15.5■□□□□ 0.07
GDF1P27539 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GDF1P27539 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GDF1P27539 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
GDF1P27539 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
GDF1P27539 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms