Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
VARSP26640 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
VARSP26640 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.91■□□□□ 0.3
VARSP26640 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.91■□□□□ 0.3
VARSP26640 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.91■□□□□ 0.3
VARSP26640 AP002469.2-201ENST00000531724 424 ntBASIC16.91■□□□□ 0.3
VARSP26640 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.91■□□□□ 0.3
VARSP26640 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.91■□□□□ 0.3
VARSP26640 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VARSP26640 AC099336.1-202ENST00000602961 463 ntBASIC16.91■□□□□ 0.3
VARSP26640 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VARSP26640 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VARSP26640 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VARSP26640 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
VARSP26640 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VARSP26640 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
VARSP26640 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VARSP26640 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.91■□□□□ 0.3
VARSP26640 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.91■□□□□ 0.3
VARSP26640 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.91■□□□□ 0.3
VARSP26640 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VARSP26640 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VARSP26640 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VARSP26640 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VARSP26640 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VARSP26640 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.9■□□□□ 0.3
VARSP26640 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VARSP26640 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VARSP26640 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
VARSP26640 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.9■□□□□ 0.3
VARSP26640 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VARSP26640 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VARSP26640 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
VARSP26640 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
VARSP26640 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VARSP26640 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
VARSP26640 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VARSP26640 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
VARSP26640 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.9■□□□□ 0.3
VARSP26640 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.9■□□□□ 0.3
VARSP26640 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.9■□□□□ 0.3
VARSP26640 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
VARSP26640 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.9■□□□□ 0.3
VARSP26640 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.9■□□□□ 0.3
VARSP26640 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
VARSP26640 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.9■□□□□ 0.3
VARSP26640 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VARSP26640 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
VARSP26640 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VARSP26640 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.9■□□□□ 0.3
VARSP26640 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VARSP26640 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VARSP26640 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.89■□□□□ 0.29
VARSP26640 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.89■□□□□ 0.29
VARSP26640 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VARSP26640 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VARSP26640 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.89■□□□□ 0.29
VARSP26640 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
VARSP26640 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VARSP26640 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.89■□□□□ 0.29
VARSP26640 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.89■□□□□ 0.29
VARSP26640 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VARSP26640 IGHV3-52-201ENST00000519770 353 ntBASIC16.89■□□□□ 0.29
VARSP26640 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
VARSP26640 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.89■□□□□ 0.29
VARSP26640 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VARSP26640 BX640515.1-201ENST00000617215 977 ntBASIC16.89■□□□□ 0.29
VARSP26640 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
VARSP26640 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VARSP26640 INTS4P1-201ENST00000438455 1935 ntBASIC16.89■□□□□ 0.29
VARSP26640 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VARSP26640 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VARSP26640 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VARSP26640 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.89■□□□□ 0.29
VARSP26640 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.89■□□□□ 0.29
VARSP26640 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.88■□□□□ 0.29
VARSP26640 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.88■□□□□ 0.29
VARSP26640 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VARSP26640 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VARSP26640 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
VARSP26640 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VARSP26640 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VARSP26640 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VARSP26640 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
VARSP26640 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.88■□□□□ 0.29
VARSP26640 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
VARSP26640 NUS1P2-201ENST00000417358 873 ntBASIC16.88■□□□□ 0.29
VARSP26640 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.88■□□□□ 0.29
VARSP26640 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.88■□□□□ 0.29
VARSP26640 AC103564.2-201ENST00000432853 1299 ntBASIC16.88■□□□□ 0.29
VARSP26640 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.88■□□□□ 0.29
VARSP26640 KRT16P4-201ENST00000453883 522 ntBASIC16.88■□□□□ 0.29
VARSP26640 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.88■□□□□ 0.29
VARSP26640 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.88■□□□□ 0.29
VARSP26640 SLC25A6P4-201ENST00000586535 553 ntBASIC16.88■□□□□ 0.29
VARSP26640 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
VARSP26640 AC138894.3-201ENST00000603787 634 ntBASIC16.88■□□□□ 0.29
VARSP26640 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VARSP26640 AC114341.1-201ENST00000618070 349 ntBASIC16.88■□□□□ 0.29
VARSP26640 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms