Protein–RNA interactions for Protein: P25440

BRD2, Bromodomain-containing protein 2, humanhuman

Known RBP Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD2P25440 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.54
BRD2P25440 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BRD2P25440 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BRD2P25440 AP001094.4-201ENST00000579008 2176 ntBASIC18.45■□□□□ 0.54
BRD2P25440 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BRD2P25440 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
BRD2P25440 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.45■□□□□ 0.54
BRD2P25440 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
BRD2P25440 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
BRD2P25440 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BRD2P25440 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
BRD2P25440 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BRD2P25440 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BRD2P25440 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
BRD2P25440 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.45■□□□□ 0.54
BRD2P25440 EMBP1-201ENST00000458200 901 ntBASIC18.45■□□□□ 0.54
BRD2P25440 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
BRD2P25440 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.45■□□□□ 0.54
BRD2P25440 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
BRD2P25440 SART3-203ENST00000546611 1184 ntBASIC18.45■□□□□ 0.54
BRD2P25440 AL359183.1-201ENST00000623796 2132 ntBASIC18.45■□□□□ 0.54
BRD2P25440 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.45■□□□□ 0.54
BRD2P25440 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.45■□□□□ 0.54
BRD2P25440 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BRD2P25440 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BRD2P25440 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
BRD2P25440 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
BRD2P25440 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
BRD2P25440 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BRD2P25440 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BRD2P25440 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC18.45■□□□□ 0.54
BRD2P25440 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BRD2P25440 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
BRD2P25440 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BRD2P25440 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BRD2P25440 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.44■□□□□ 0.54
BRD2P25440 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BRD2P25440 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.44■□□□□ 0.54
BRD2P25440 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
BRD2P25440 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
BRD2P25440 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BRD2P25440 AC093525.9-201ENST00000624961 1746 ntBASIC18.44■□□□□ 0.54
BRD2P25440 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.44■□□□□ 0.54
BRD2P25440 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
BRD2P25440 AL450487.1-201ENST00000426799 995 ntBASIC18.44■□□□□ 0.54
BRD2P25440 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.44■□□□□ 0.54
BRD2P25440 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.44■□□□□ 0.54
BRD2P25440 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
BRD2P25440 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BRD2P25440 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BRD2P25440 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
BRD2P25440 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BRD2P25440 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.44■□□□□ 0.54
BRD2P25440 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.44■□□□□ 0.54
BRD2P25440 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC18.44■□□□□ 0.54
BRD2P25440 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
BRD2P25440 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
BRD2P25440 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.44■□□□□ 0.54
BRD2P25440 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
BRD2P25440 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
BRD2P25440 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.43■□□□□ 0.54
BRD2P25440 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
BRD2P25440 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BRD2P25440 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.43■□□□□ 0.54
BRD2P25440 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
BRD2P25440 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BRD2P25440 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.43■□□□□ 0.54
BRD2P25440 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BRD2P25440 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC18.43■□□□□ 0.54
BRD2P25440 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
BRD2P25440 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BRD2P25440 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BRD2P25440 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BRD2P25440 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.43■□□□□ 0.54
BRD2P25440 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
BRD2P25440 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BRD2P25440 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.43■□□□□ 0.54
BRD2P25440 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
BRD2P25440 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BRD2P25440 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
BRD2P25440 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
BRD2P25440 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.43■□□□□ 0.54
BRD2P25440 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
BRD2P25440 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.43■□□□□ 0.54
BRD2P25440 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.43■□□□□ 0.54
BRD2P25440 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.43■□□□□ 0.54
BRD2P25440 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.43■□□□□ 0.54
BRD2P25440 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
BRD2P25440 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
BRD2P25440 AL139288.1-201ENST00000623748 933 ntBASIC18.43■□□□□ 0.54
BRD2P25440 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.43■□□□□ 0.54
BRD2P25440 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
BRD2P25440 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.43■□□□□ 0.54
BRD2P25440 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
BRD2P25440 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.43■□□□□ 0.54
BRD2P25440 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
BRD2P25440 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BRD2P25440 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
BRD2P25440 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
BRD2P25440 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms