Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH3P22223 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDH3P22223 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH3P22223 AL022342.1-201ENST00000400363 863 ntBASIC16.86■□□□□ 0.29
CDH3P22223 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDH3P22223 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.86■□□□□ 0.29
CDH3P22223 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CDH3P22223 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH3P22223 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CDH3P22223 AC002558.1-201ENST00000488906 803 ntBASIC16.86■□□□□ 0.29
CDH3P22223 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.86■□□□□ 0.29
CDH3P22223 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.86■□□□□ 0.29
CDH3P22223 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.86■□□□□ 0.29
CDH3P22223 AL049840.3-201ENST00000602669 611 ntBASIC16.86■□□□□ 0.29
CDH3P22223 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDH3P22223 MIR7706-201ENST00000613747 67 ntBASIC16.86■□□□□ 0.29
CDH3P22223 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.86■□□□□ 0.29
CDH3P22223 AC073592.4-201ENST00000623827 446 ntBASIC16.86■□□□□ 0.29
CDH3P22223 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.86■□□□□ 0.29
CDH3P22223 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.86■□□□□ 0.29
CDH3P22223 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH3P22223 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH3P22223 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH3P22223 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH3P22223 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDH3P22223 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.86■□□□□ 0.29
CDH3P22223 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH3P22223 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
CDH3P22223 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.86■□□□□ 0.29
CDH3P22223 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CDH3P22223 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CDH3P22223 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CDH3P22223 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH3P22223 HLA-J-201ENST00000462773 1622 ntBASIC16.85■□□□□ 0.29
CDH3P22223 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.85■□□□□ 0.29
CDH3P22223 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDH3P22223 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH3P22223 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.85■□□□□ 0.29
CDH3P22223 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.85■□□□□ 0.29
CDH3P22223 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH3P22223 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH3P22223 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH3P22223 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH3P22223 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH3P22223 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CDH3P22223 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH3P22223 MYCLP1-201ENST00000372451 1075 ntBASIC16.85■□□□□ 0.29
CDH3P22223 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.85■□□□□ 0.29
CDH3P22223 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.85■□□□□ 0.29
CDH3P22223 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.85■□□□□ 0.29
CDH3P22223 AC139887.3-201ENST00000568585 713 ntBASIC16.85■□□□□ 0.29
CDH3P22223 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.85■□□□□ 0.29
CDH3P22223 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.85■□□□□ 0.29
CDH3P22223 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.85■□□□□ 0.29
CDH3P22223 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.85■□□□□ 0.29
CDH3P22223 BX640515.1-201ENST00000617215 977 ntBASIC16.85■□□□□ 0.29
CDH3P22223 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CDH3P22223 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH3P22223 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CDH3P22223 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.85■□□□□ 0.29
CDH3P22223 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH3P22223 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDH3P22223 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CDH3P22223 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.85■□□□□ 0.29
CDH3P22223 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.85■□□□□ 0.29
CDH3P22223 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.85■□□□□ 0.29
CDH3P22223 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CDH3P22223 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH3P22223 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH3P22223 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH3P22223 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH3P22223 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CDH3P22223 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH3P22223 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CDH3P22223 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH3P22223 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH3P22223 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.84■□□□□ 0.29
CDH3P22223 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.84■□□□□ 0.29
CDH3P22223 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.84■□□□□ 0.29
CDH3P22223 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH3P22223 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH3P22223 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.84■□□□□ 0.29
CDH3P22223 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH3P22223 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.84■□□□□ 0.29
CDH3P22223 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.84■□□□□ 0.29
CDH3P22223 SIGLEC30P-201ENST00000455569 941 ntBASIC16.84■□□□□ 0.29
CDH3P22223 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CDH3P22223 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.84■□□□□ 0.29
CDH3P22223 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.84■□□□□ 0.29
CDH3P22223 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
CDH3P22223 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CDH3P22223 STK25P1-201ENST00000585406 838 ntBASIC16.84■□□□□ 0.29
CDH3P22223 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.84■□□□□ 0.29
CDH3P22223 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.84■□□□□ 0.29
CDH3P22223 IL9RP2-201ENST00000423948 1312 ntBASIC16.84■□□□□ 0.29
CDH3P22223 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH3P22223 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH3P22223 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH3P22223 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CDH3P22223 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms