Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
NCLP19338 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
NCLP19338 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC20.46■□□□□ 0.87
NCLP19338 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NCLP19338 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC20.46■□□□□ 0.87
NCLP19338 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.46■□□□□ 0.87
NCLP19338 AC016396.2-201ENST00000562575 1417 ntBASIC20.46■□□□□ 0.87
NCLP19338 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NCLP19338 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NCLP19338 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
NCLP19338 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NCLP19338 PCED1CP-201ENST00000419887 785 ntBASIC20.46■□□□□ 0.87
NCLP19338 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.46■□□□□ 0.87
NCLP19338 KRT18P65-201ENST00000439811 1286 ntBASIC20.46■□□□□ 0.87
NCLP19338 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NCLP19338 AC112907.2-201ENST00000448639 330 ntBASIC20.46■□□□□ 0.87
NCLP19338 AC113404.2-201ENST00000507884 177 ntBASIC20.46■□□□□ 0.87
NCLP19338 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
NCLP19338 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.46■□□□□ 0.87
NCLP19338 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.46■□□□□ 0.87
NCLP19338 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.46■□□□□ 0.87
NCLP19338 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.46■□□□□ 0.87
NCLP19338 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NCLP19338 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NCLP19338 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NCLP19338 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NCLP19338 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.46■□□□□ 0.87
NCLP19338 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
NCLP19338 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NCLP19338 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
NCLP19338 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
NCLP19338 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NCLP19338 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
NCLP19338 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
NCLP19338 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NCLP19338 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.45■□□□□ 0.86
NCLP19338 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
NCLP19338 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NCLP19338 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.45■□□□□ 0.86
NCLP19338 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.45■□□□□ 0.86
NCLP19338 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.45■□□□□ 0.86
NCLP19338 UPK3BP1-201ENST00000428678 509 ntBASIC20.45■□□□□ 0.86
NCLP19338 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NCLP19338 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.45■□□□□ 0.86
NCLP19338 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.45■□□□□ 0.86
NCLP19338 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
NCLP19338 AC024563.2-201ENST00000603282 481 ntBASIC20.45■□□□□ 0.86
NCLP19338 HYMAI.1-201ENST00000620949 238 ntBASIC20.45■□□□□ 0.86
NCLP19338 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
NCLP19338 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NCLP19338 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC20.45■□□□□ 0.86
NCLP19338 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.45■□□□□ 0.86
NCLP19338 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NCLP19338 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
NCLP19338 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC20.45■□□□□ 0.86
NCLP19338 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC20.45■□□□□ 0.86
NCLP19338 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NCLP19338 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NCLP19338 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
NCLP19338 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NCLP19338 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC20.45■□□□□ 0.86
NCLP19338 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NCLP19338 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC20.45■□□□□ 0.86
NCLP19338 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NCLP19338 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
NCLP19338 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
NCLP19338 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
NCLP19338 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC20.44■□□□□ 0.86
NCLP19338 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
NCLP19338 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NCLP19338 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NCLP19338 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
NCLP19338 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC20.44■□□□□ 0.86
NCLP19338 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NCLP19338 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC20.44■□□□□ 0.86
NCLP19338 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC20.44■□□□□ 0.86
NCLP19338 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
NCLP19338 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
NCLP19338 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
NCLP19338 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.44■□□□□ 0.86
NCLP19338 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NCLP19338 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NCLP19338 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.44■□□□□ 0.86
NCLP19338 SPDYE15P-201ENST00000424157 909 ntBASIC20.44■□□□□ 0.86
NCLP19338 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NCLP19338 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NCLP19338 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.44■□□□□ 0.86
NCLP19338 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.44■□□□□ 0.86
NCLP19338 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.44■□□□□ 0.86
NCLP19338 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.44■□□□□ 0.86
NCLP19338 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
NCLP19338 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.44■□□□□ 0.86
NCLP19338 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.44■□□□□ 0.86
NCLP19338 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.44■□□□□ 0.86
NCLP19338 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.44■□□□□ 0.86
NCLP19338 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
NCLP19338 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NCLP19338 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NCLP19338 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
NCLP19338 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms